DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and snf-11

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_505873.2 Gene:snf-11 / 191770 WormBaseID:WBGene00004910 Length:610 Species:Caenorhabditis elegans


Alignment Length:594 Identity:257/594 - (43%)
Similarity:381/594 - (64%) Gaps:39/594 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALGQH 90
            |||.||...||::|.||:|:.|.||||||||||:|||||||:||.|.||..|.|||.:|.:.||.
 Worm     9 EREQWSSWADFIMSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVFCGAPLFILETSWGQL 73

  Fly    91 NRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNS-LPWTSCNNIWNT 154
            ...|.:..: ::.|:|||:|.|..::||:::.||.|:::|:..:.:.|||.| :||.:|::.|||
 Worm    74 MSVGGLGMF-KICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLYNSFTMSDVPWKNCDHAWNT 137

  Fly   155 PNCR------PFESQNASRVPVIGNYSDLYAMGNQSL-LYNETYMNG--------SSLDTSAVGH 204
            ||||      |.:|..     .|..:.::..:.:..: .|.:.:..|        |:.|.|.|  
 Worm   138 PNCRSEYVKIPCDSNR-----TIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVCSAADLSVV-- 195

  Fly   205 VEGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTA 269
                 |...|::|..:|.:  |.|:.:.|.|:||:||.||:|::|||..::||:..:||||:.||
 Worm   196 -----SPVKEFWNHRVLGI--SSGLENPGGIRWDLALFLLLVWIICYLCIFKGVKWTGKVVYITA 253

  Fly   270 LFPYAVLLILLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASY 334
            .|||.:|..||||||||.|:.:|:::||.|:||.:.:::|||||.||||||.|.|.|.|:|..||
 Worm   254 SFPYMMLFCLLIRGLTLEGAGVGLEFYLKPDFSKLLESKVWVDAVTQVFFSYGLGLGALVALGSY 318

  Fly   335 NKYHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIAT 399
            ||::|||||.||...|:||.||..|||||||.:|:||......:.:||..||||:|:.||:.|..
 Worm   319 NKFNNNVYKQALTVCFVNSGTSVFAGFVIFSFIGFMATQQEKSVAEVAQAGPGLLFLAYPSGILQ 383

  Fly   400 MPASTFWALIFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKR---NRELFVAGLFSLYFVVGLA 461
            :|.:.||:.:||:|:|.||:||.|...|...||:.||||:|:|   .||:||..:..:.:::||.
 Worm   384 LPYTQFWSCLFFLMVLFLGVDSQFCTMEGFFTAIIDEFPQIRRKKYGREIFVGVICVISYLIGLT 448

  Fly   462 SCTQGGFYFFHLLDRYAA-GYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRF 525
            :.|:||||.|.|.|.||| |:::|..:|||.||:||..|.:|:.|.::.|||:.|..:|:.||.|
 Worm   449 TVTEGGFYVFQLFDFYAASGWALLWLLFFECIAISWSLGIDRWYEHMKSMIGYYPSAWWKFCWVF 513

  Fly   526 VAPIFLLFITVYGLIGYEPL---TYADYVYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSLR 587
            ..|.....:.::|||.|:||   .| :|.||.|.:..||.::.||::.||..||:....|||:::
 Worm   514 ATPSVCFGVLLFGLIKYQPLRIDAY-NYDYPVWGHIFGWFLSLSSMLCIPGYAIWIWFKTPGTVQ 577

  Fly   588 QRFTILTTP 596
            ::..:|..|
 Worm   578 EKIKLLCRP 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 256/593 (43%)
snf-11NP_505873.2 SLC6sbd-TauT-like 10..586 CDD:271387 255/591 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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