DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and snf-9

DIOPT Version :10

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_503077.2 Gene:snf-9 / 178512 WormBaseID:WBGene00004908 Length:713 Species:Caenorhabditis elegans


Alignment Length:685 Identity:201/685 - (29%)
Similarity:316/685 - (46%) Gaps:111/685 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SPTGHISKSKTPTPHD--------NDNNSISDERET--------WSGKVDFLLSVIGFAVDLANV 50
            |||...|.|.:....|        .|:.|..:..|:        |..:::||||.:|.||.|.|:
 Worm    10 SPTQRRSPSDSSAAEDQRIATTIVRDSGSSKEIEESQADPCRGAWGNQIEFLLSTLGMAVGLGNI 74

  Fly    51 WRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALGQHNRKGAITCWGRLVPLFKGIGYAVVL 115
            ||||...|.|||.||||||....::.|:|..|:|..|||::|..|...:.|..|:.:|:|:..|.
 Worm    75 WRFPTRAYNNGGSAFLVPYVACALLFGLPAVYLEFLLGQYHRTTAPIIFRRFAPILQGVGWMAVA 139

  Fly   116 IAFYVDFYYNVIIAWSLRFFFASFT--NSLPWTSCNNIWNT----------PNCRPFESQNASRV 168
            ::..|..||.:||.|| ..:.||..  ::..|..|.|.||.          |.|..|.:......
 Worm   140 VSSLVAIYYIIIIGWS-TVYMASIVMGHTSKWNRCGNSWNNAESCVDSGLQPLCASFNATGNETS 203

  Fly   169 PVIGNYSD-----LYAMGNQS------LLYNETYMNGSSLDTSAVGHVEGFQSAASEYFNRYILE 222
            ||..|.|.     .|...|.|      |.:|:|.|                .:|..:||..|:::
 Worm   204 PVWANLSSEGRGKFYIYLNTSCYDKVDLEFNKTKM----------------IAATEQYFFDYVVK 252

  Fly   223 LNRSEGIHDLGAIK----WDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIRG 283
              .::|..:..:|.    :.|..|.|||.||    ||||:...||..:.....||.::::|..||
 Worm   253 --PTDGFLEFSSINFKSFFGMNACWLIVVLI----LWKGVGYMGKASYVIVTLPYFIIILLFFRG 311

  Fly   284 LTLPGSFLGIQYYL-TPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALL 347
            :||.|:..||.||| .|::|.::....|.:|..|:.||||.|:|.|:..||::|.:||.::|||:
 Worm   312 ITLDGAEDGIYYYLGNPDWSKVFMPATWGEALKQLCFSLGIGYGGLIGMASFSKPNNNCFRDALI 376

  Fly   348 TSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIATMPASTFWALIFFM 412
            ....::..|.:.|..:||.||::|...|..:.:|..:|..|.||.:|.|:..||....|:.:||:
 Worm   377 VIIGDTMMSLVGGAAVFSTLGFLAKKKGCSVAEVVNDGFSLAFVAFPEALGRMPLPELWSFLFFL 441

  Fly   413 MLLTLGLDSSFGGSEAIITALSDEFPKIKRNRELFVAGLFSL-YFVVGLASCTQGGFYFFHLLDR 476
            ||..||:.:.........:::.|:|..: |.|:..||.|:.| .:|:|:...|.||||:|.:.|.
 Worm   442 MLFFLGISTEVAYVNVFCSSICDQFVNL-RKRKWLVAVLWCLVLYVLGVVMVTDGGFYWFIMFDE 505

  Fly   477 YAAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGR----------YWQVCWRFVAPIFL 531
            ||||.|...||..|.:.|:::||......|:::|.|....:          |:...|.||.|:..
 Worm   506 YAAGVSSCCAVTAEVLIVAYVYGRRNQLADMKEMFGESKNKCTSWIGQHSPYFGFNWMFVTPVLG 570

  Fly   532 LFITVYGLIGYEPLTYAD---YVYPSWANALGWCIAGSSVVMIPAVA------------------ 575
            ..:.|...|...|....:   .:||...:.:||.:....:.::|..|                  
 Worm   571 SILIVLASIRQYPYQTDENKPNMYPLAFDIVGWAVCLLPMALVPIFAFCAFVEFKRKGHDLRALF 635

  Fly   576 -----------IFKLLSTPGSLRQRFTILTTPWRD 599
                       |::.:::....:|:......||.|
 Worm   636 MKQRQLKSFGRIYQTMASKDRAKQKILPDREPWDD 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 190/648 (29%)
snf-9NP_503077.2 SLC6sbd 52..577 CDD:271359 179/548 (33%)

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