DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and snf-5

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_496735.1 Gene:snf-5 / 174923 WormBaseID:WBGene00004904 Length:728 Species:Caenorhabditis elegans


Alignment Length:595 Identity:174/595 - (29%)
Similarity:297/595 - (49%) Gaps:54/595 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TPHDNDNNSISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGI 78
            ||.:.:    .::|:.:....:|:|:.:|.||.|.|:||||...|.|||.|||:||.....:.|:
 Worm    73 TPPEEE----EEKRDGFGNSFEFVLTSLGLAVGLGNIWRFPTRAYNNGGSAFLIPYLTCAFLFGL 133

  Fly    79 PLFYMELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAW-------SLRFFF 136
            |..|.|...||:..|.....:.|:.|:.:|:|:..|.:|..|..||.||::|       ..|..|
 Worm   134 PAVYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYIVIVSWISIYMINICRGHF 198

  Fly   137 ASFTNSLPWTSCNNIWNT-PNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNET--------YM 192
            |.      |:.|||.||. .:|.....|...:     |::.:.|   .|.|:|.:        |.
 Worm   199 AL------WSHCNNDWNNGTSCITMADQYLCK-----NHTKVMA---NSTLWNSSLPIPDKMVYF 249

  Fly   193 NGSSLDTSAVGHVEGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKG 257
            ||:..|.:..    ...:|..:||..||::  .|.|:.|.|...|.:...:.:.:|:....:.||
 Worm   250 NGACQDANGT----DVSTATEQYFMTYIVQ--PSSGMLDFGGFNWPVFAAMSVCWLLTGLGILKG 308

  Fly   258 ISTSGKVVWFTALFPYAVLLILLIRGLTLPGSFLGIQ-YYLTPNFSAIYKAEVWVDAATQVFFSL 321
            ....||:.:.:.|.||.::::|.|.|:...||.:|:: |:.|||::.:|:.:.|.:|..|:.|||
 Worm   309 AKIMGKISYVSVLVPYVLVVVLFINGVFQDGSGVGLEMYFGTPNYTKLYEQDTWTEALKQLCFSL 373

  Fly   322 GPGFGVLLAYASYNKYHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGP 386
            ..|.|.|::.:||:...||:::|||:....::..|.:.|..:|:.|||:|...|..::||...|.
 Worm   374 SVGHGGLISLSSYSPKRNNIFRDALIVIIGDTTMSLVGGGAVFATLGYLAKATGQDVKDVVKSGL 438

  Fly   387 GLVFVVYPAAIATMPASTFWALIFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKRNRELFVAGL 451
            .|.|||||.|:..||....|..|||:||..||..:.....:...:.:.|::|:.:..:.:.|...
 Worm   439 SLAFVVYPEAMTRMPVPWLWCFIFFLMLFLLGASTEIALVDVFCSCIYDQYPRFRNRKWIVVIAW 503

  Fly   452 FSLYFVVGLASCTQGGFYFFHLLDRYAAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPG 516
            .|:.:.:||...|:.|:|:|.:.|.||||:|.:..|..|.:.:.:|||.....:||.:::|....
 Worm   504 CSVLYCIGLVFSTRAGYYWFEMFDEYAAGFSSVCTVVCELLVMMYIYGFRNVRDDITEVVGHARN 568

  Fly   517 R----------YWQVCWRFVAPIFLLFITVYGLIGYEPLTYADYVYPSWANALGWCIAGSSVVMI 571
            :          |:...|..::|...|.:.....:...|......:||:..:..||.::...|:::
 Worm   569 KFTGAIGAHSWYFTANWMVISPSIALILVGLSFVREYPYMGRHDIYPAVFDIFGWFLSFLPVIIV 633

  Fly   572 PAVAIFKLLS 581
            |   ||.||:
 Worm   634 P---IFMLLN 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 172/582 (30%)
snf-5NP_496735.1 SLC6sbd 83..601 CDD:271359 160/537 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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