DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and snf-1

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_491491.2 Gene:snf-1 / 172119 WormBaseID:WBGene00004900 Length:617 Species:Caenorhabditis elegans


Alignment Length:587 Identity:132/587 - (22%)
Similarity:247/587 - (42%) Gaps:91/587 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELAL 87
            :.:.|:.|..|::|::|.:.:...:.|....|.|..:|||.||...|.|::.|..:|...||:::
 Worm    17 VEEWRDLWPSKIEFIVSAMAYLFAMTNFLNLPKLILENGGVAFAAAYAIVVGVLCMPTMVMEMSI 81

  Fly    88 GQHNRKGAITCWGRLVPLFKGIG-----YAVVLIAFYVDFYYNVIIAWSLRFFFASF---TNSLP 144
            ||...:..:..:..|.|:|:|||     :.:|::|....|...:.:  .|.::|.:|   .:.||
 Worm    82 GQVTGRAPVLAFYHLFPVFRGIGVSQILFTMVVLACMTKFLSTLCL--FLYYYFWTFHAGRSGLP 144

  Fly   145 WTSCNNIWNTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQ 209
            |.         ||:.|....:......|:.:::..:.|:        :|....::|.:       
 Worm   145 WL---------NCKAFPEFVSQPCREAGSITNITQINNR--------LNTIQAESSMM------- 185

  Fly   210 SAASEYFNRYILELNR-SEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPY 273
                    :::..|.| ||.|.|....::.:.:....:::..:.::..|:...||.|.|..:..:
 Worm   186 --------QFLTTLERPSESIADFKDFQYPILIAQGAIWIAIFVAICFGVRFVGKTVAFVLMLAF 242

  Fly   274 AVLLILLIRGLTLPG--SFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNK 336
            :.||:..:|..||.|  ..|.| |:...::..:...:||..|..|.....|.|:|..:..:||.|
 Worm   243 SSLLVFFLRSATLGGVTEILEI-YWKATDWEKLADYQVWRLAIEQAILGTGIGYGAFITMSSYMK 306

  Fly   337 YHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPG-----LVFVVY--- 393
            ..||:..|::..|..:...||:....|..::||::..||:...::...|..     |.:|.|   
 Worm   307 RSNNLVCDSIFLSVWHLIISFVQTMSIICIVGYLSMKLGIHPTELLETGEDQMWYMLAYVSYLPK 371

  Fly   394 --PAAIATMPASTFWALIFFMMLLTLG-LDSSFGGSEAIITALSDEFPKIKRNRELFVAGLFSLY 455
              ...:.|:...|.:::|..:.|..|. .:.:||          :.:.|..|.   |...||...
 Worm   372 LWSGVLLTICICTMFSVITILALSVLSTFEDAFG----------ENWSKCCRR---FFLALFVCL 423

  Fly   456 FVVGLA--SCTQGGFYFFHLLDR---YAAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPP 515
            |..||.  ..|..|.:.:.|..|   |...|.||.|   |..|.:|.|..::..:|:.:|:.   
 Worm   424 FCFGLTVYFATNAGRHAYELATRSIKYCTIYFILTA---ELFATAWFYCAHKLGKDLHNMMR--- 482

  Fly   516 GRYWQVCWRFVAPIFLLFITVYGLI--GYEPLTYADYVYPSWANAL-GWCIA---GSSVVMIPAV 574
                ..|.......||.|..:..::  |...|...||.:.|::..: .|..:   |.::.|:|.:
 Worm   483 ----SRCCSCFGHFFLYFTYLLPILPAGVAFLNALDYKFSSFSAPIHEWKYSEYVGIAIAMVPLI 543

  Fly   575 AI 576
            .|
 Worm   544 PI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 132/583 (23%)
snf-1NP_491491.2 SNF 21..554 CDD:264495 132/583 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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