DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a20

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_579830.1 Gene:Slc6a20 / 113918 RGDID:621651 Length:616 Species:Rattus norvegicus


Alignment Length:643 Identity:220/643 - (34%)
Similarity:319/643 - (49%) Gaps:127/643 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SKSKTPTPHDNDNNSISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIM 72
            |:.:.|.|.:.....:...|..|...:.|:.:.|.:||.|.|||||||||...|||:|||||.||
  Rat    10 SRGQRPGPDEKRARDMEKARPQWGNPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYLIM 74

  Fly    73 LVVGGIPLFYMELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFA 137
            |:|.|:||.|:|||:||..|:|:|..|..:.|...|:|.|.|:::|::..|||||.||...:.|.
  Rat    75 LIVEGMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFH 139

  Fly   138 SFTNSLPWTSCNNIWNTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAV 202
            ||.:.|||:.|                                               .|:::..
  Rat   140 SFQDPLPWSVC-----------------------------------------------PLNSNRT 157

  Fly   203 GHVEGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWF 267
            |:.|..:.|:|..:..|...||.|..|.:.|.::|:.||||.:.:|:.|..:.:|..::||||:|
  Rat   158 GYDEECEKASSTQYFWYRKTLNISPSIQENGGVQWEPALCLTLAWLMVYLCILRGTESTGKVVYF 222

  Fly   268 TALFPYAVLLILLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYA 332
            |||.||.||:|.|:|||||.|:..|:.|..||....:...:.|::||||:|||||.|||.|:|:|
  Rat   223 TALMPYCVLIIYLVRGLTLHGATNGLMYMFTPKIEQLANPKAWINAATQIFFSLGLGFGSLIAFA 287

  Fly   333 SYNKYHNNVYKDALLTSFINSATSFIAGFVIFSVLG----------------------------- 368
            |||:..|:..|.|::.|.|||:||..|..|.||:.|                             
  Rat   288 SYNEPSNDCQKHAVIVSVINSSTSIFASIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFL 352

  Fly   369 ----------YMAHTLGVRIEDV---------------ATEGPGLVFVVYPAAIATMPASTFWAL 408
                      |:|.|...:..:|               |.:|.||.|:||..||..|..|..|::
  Rat   353 TASNLEEVKDYLASTYPNKYSEVFPHIRNCSLESELNTAVQGTGLAFIVYAEAIKNMEVSQLWSV 417

  Fly   409 IFFMMLLTLGLDSSFGGSEAIITALSDE------FPKIKRNRELFVAGLFSLY-FVVGLASCTQG 466
            ::|.|||.||:.|..|.:.||:|.|:|.      .||..      ::||..|. ..||:....:.
  Rat   418 LYFFMLLMLGMGSMLGNTAAILTPLTDSKVISSYLPKEA------ISGLVCLINCAVGMVFTMEA 476

  Fly   467 GFYFFHLLDRYAAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAP--- 528
            |.|:|.:.:.|||..|:|:.|..|.|||.::||..||..|:|.|.|.|...||:..|.||:|   
  Rat   477 GNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLRRFESDLRAMTGRPLNWYWKAMWAFVSPLLI 541

  Fly   529 --IFLLFITVY---GLIGYE--PLTYADYV---YPSWANALGWCIAGSSVVMIPAVAI 576
              :|:.:::.|   |.:.|:  ..|....|   ||..|.|:...:..||.:.||.||:
  Rat   542 IGLFIFYLSDYILTGTLQYQAWDATQGQLVTKDYPPHALAVIGLLVASSTMCIPLVAL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 217/624 (35%)
Slc6a20NP_579830.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 3/15 (20%)
SLC5-6-like_sbd 26..601 CDD:294310 217/627 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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