DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a8

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_598748.1 Gene:Slc6a8 / 102857 MGIID:2147834 Length:640 Species:Mus musculus


Alignment Length:615 Identity:260/615 - (42%)
Similarity:377/615 - (61%) Gaps:49/615 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALGQHN 91
            ||||:.::||::|.:||||.|.|||||||||||||||.||:||.::.:|||||:|::|::|||..
Mouse    52 RETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFM 116

  Fly    92 RKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIWNTPN 156
            :.|:|..| .:.|||||:|||.::|.||.:.||.:::||...:...|||.:|||.:|.:.||||:
Mouse   117 KAGSINVW-NICPLFKGLGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNTPD 180

  Fly   157 CRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAASEYFNRYIL 221
            |                         ..:..:|...| :||.......:...:|...|::...:|
Mouse   181 C-------------------------VEIFRHEDCAN-ASLANLTCDQLADRRSPVIEFWENKVL 219

  Fly   222 ELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIRGLTL 286
            .|  |.|:...||:.|::.||||..:::.||.:|||:.::||:|:|||.|||.||::||:||:.|
Mouse   220 RL--STGLEVPGALNWEVTLCLLACWVLVYFCVWKGVKSTGKIVYFTATFPYVVLVVLLVRGVLL 282

  Fly   287 PGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALLTSFI 351
            ||:..||.|||.|::|.:...:||:||.||:|||...|.|.|.|..|||:::||.||||::.:.|
Mouse   283 PGALDGIIYYLKPDWSKLGSPQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALI 347

  Fly   352 NSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIATMPASTFWALIFFMMLLT 416
            ||.|||.||||:||:||:||...||.|..||..||||.|:.||.|:..||.:..||.:||.|||.
Mouse   348 NSGTSFFAGFVVFSILGFMATEQGVHISKVAESGPGLAFIAYPRAVTLMPVAPLWAALFFFMLLL 412

  Fly   417 LGLDSSFGGSEAIITALSDEFPK---IKRNRELFVAGLFSLYFVVGLASCT-----QGGFYFFHL 473
            |||||.|.|.|..||.|.|..|.   .:..||:.||...:|.||:.|:..|     :||.|.|.|
Mouse   413 LGLDSQFVGVEGFITGLLDLLPASYYFRFQREISVALCCALCFVIDLSMVTDVSGGKGGMYVFQL 477

  Fly   474 LDRY-AAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFITVY 537
            .|.| |:|.::|...|:|.:.|:|:||.:||.:||..|||:.|..:.:.||.|..|:..:.|.::
Mouse   478 FDYYSASGTTLLWQAFWECVVVAWVYGADRFMDDIACMIGYRPCPWMKWCWSFFTPLVCMGIFIF 542

  Fly   538 GLIGYEPLTYAD-YVYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSLRQRFTILTTP-W--- 597
            .::.||||.|.: ||||.|..|:||..|.||::.:|...:..||...|::.:|:..||.| |   
Mouse   543 NIVYYEPLVYNNTYVYPWWGEAMGWAFALSSMLCVPLHLLGCLLRAKGTMAERWQHLTQPIWGLH 607

  Fly   598 -RDQQSMAMVLNGVTTEVTVVRLTDTETAK 626
             .:.::....:.|:||...|     :|::|
Mouse   608 HLEYRAQDADVRGLTTLTPV-----SESSK 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 253/580 (44%)
Slc6a8NP_598748.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SLC6sbd_CT1 52..626 CDD:271397 257/602 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53371
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

Return to query results.
Submit another query.