DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and Slc6a20a

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_631881.1 Gene:Slc6a20a / 102680 MGIID:2143217 Length:592 Species:Mus musculus


Alignment Length:624 Identity:218/624 - (34%)
Similarity:311/624 - (49%) Gaps:127/624 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALGQHN 91
            |..|...:.|:.:.|.:||.|.|||||||||...|||:|||||.|||:|.|:||.|:|||:||..
Mouse     5 RPQWGHPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVGQRM 69

  Fly    92 RKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIWNTPN 156
            |:|:|..|..:.|...|:|.|.|:::|::..|||||.||...:.|.||.:.|||:.|        
Mouse    70 RQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPLPWSVC-------- 126

  Fly   157 CRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAASEYFNRYIL 221
                        |:..|::                           |:.|..:.|:|..:..|..
Mouse   127 ------------PLNSNHT---------------------------GYDEECEKASSTQYFWYRK 152

  Fly   222 ELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIRGLTL 286
            .||.|..|.:.|.::|:.||||.:.:|:.|..:.:|..::||||:|||..||.||:|.|:|||||
Mouse   153 TLNISPSIQENGGVQWEPALCLTLAWLMVYLCILRGTESTGKVVYFTASMPYCVLIIYLVRGLTL 217

  Fly   287 PGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALLTSFI 351
            .|:..|:.|..||....:...:.|::||||:|||||.|||.|:|:||||:..||..|.|::.|.|
Mouse   218 HGATNGLMYMFTPKMEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSII 282

  Fly   352 NSATSFIAGFVIFSVLGYMA--------------------------------------------- 371
            ||:||..|..|.||:.|:.|                                             
Mouse   283 NSSTSIFASIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTVSNLEEVKNYLASTYPNK 347

  Fly   372 ------HTLGVRIE---DVATEGPGLVFVVYPAAIATMPASTFWALIFFMMLLTLGLDSSFGGSE 427
                  |.....:|   |.|.:|.||.|:||..||..|..|..|::::|.|||.||:.|..|.:.
Mouse   348 YSEVFPHIRNCSLESELDTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLMLGIGSMLGNTA 412

  Fly   428 AIITALSDE------FPKIKRNRELFVAGLFSLY-FVVGLASCTQGGFYFFHLLDRYAAGYSILV 485
            ||:|.|:|.      .||..      ::||..|. ..||:....:.|.|:|.:.:.|||..|:|:
Mouse   413 AILTPLTDSKVISSYLPKEA------ISGLVCLINCAVGMVFTMEAGNYWFDIFNDYAATLSLLL 471

  Fly   486 AVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAP-----IFLLFITVY---GLIGY 542
            .|..|.|||.::||..||..|:|.|.|.....||:|.|.||:|     :|:.:::.|   |.:.|
Mouse   472 IVLVETIAVCYVYGLKRFESDLRAMTGRTLSWYWKVMWAFVSPLLIVGLFIFYLSDYILTGTLQY 536

  Fly   543 E--PLTYADYV---YPSWANALGWCIAGSSVVMIPAVAI 576
            :  ..|....|   ||..|.|:...:..||.:.||.||:
Mouse   537 QAWDATQGQLVTKDYPPHALAVIGLLVASSTMCIPLVAL 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 218/624 (35%)
Slc6a20aNP_631881.1 SLC5-6-like_sbd 2..577 CDD:294310 218/624 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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