DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and slc6a5

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_031756248.1 Gene:slc6a5 / 100495275 XenbaseID:XB-GENE-993852 Length:789 Species:Xenopus tropicalis


Alignment Length:592 Identity:272/592 - (45%)
Similarity:386/592 - (65%) Gaps:27/592 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DNDNNSISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLF 81
            :.|.|.   .|..||.|:||:||::|:||.|.||||||||.:||||||||:||..||.:.|:|:|
 Frog   176 EGDENK---ARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFKNGGGAFLIPYLTMLALAGLPIF 237

  Fly    82 YMELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWT 146
            |||:||||...:|.|:.| :.:|..:|.|.|:::|:..:..|||:|:.:::.:.|||..:.|||.
 Frog   238 YMEVALGQFASQGPISVW-KAIPALQGCGIAMLIISVLIAIYYNIIMCYTIFYLFASLVSVLPWA 301

  Fly   147 SCNNIWNTPNCRPFESQNASRVP----VIGNYSDLYAMGN---QSLLYNETYMNGSSLDTSAVGH 204
            ||.|.||||:|:     :..|:.    :||:..:::...:   .:...|.|.:|.:|       |
 Frog   302 SCTNPWNTPDCK-----DKDRLMLDSCIIGSQPNIHIKNSTFCMTAYPNLTLVNFTS-------H 354

  Fly   205 V-EGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFT 268
            . :.|.|.:.|||...:|::  |.||...|.|:|.:|:||.:.:.|.|.||.|||.:|||||:||
 Frog   355 ANKSFVSGSEEYFKYNMLKI--SAGIEYPGEIRWPLAICLFLAWTIVYASLAKGIKSSGKVVYFT 417

  Fly   269 ALFPYAVLLILLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYAS 333
            |.|||.||:||||||:||||:..||.:::.|.:..:..|.||.|||||:||||...:|.|:..:|
 Frog   418 ATFPYVVLVILLIRGVTLPGAGDGIWWFIMPKWEKLMDAMVWKDAATQIFFSLSAAWGGLITLSS 482

  Fly   334 YNKYHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIA 398
            |||:|||||:|.|:.:..|||||..||||||||:|:|||.|.|.||.||.:|||:.|||||.|:.
 Frog   483 YNKFHNNVYRDTLIVTCTNSATSIFAGFVIFSVIGFMAHILNVDIEKVADQGPGIAFVVYPEALT 547

  Fly   399 TMPASTFWALIFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKR-NRELFVAGLFSLYFVVGLAS 462
            .:|.|.|||:|||:||||||||:.|...|.|:|::||||||:.| ::.||.......:|::|...
 Frog   548 RLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKLLRPHKPLFTLICCVAFFIMGFPM 612

  Fly   463 CTQGGFYFFHLLDRYAAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVA 527
            .||||.|...|:|.|||.||:::...||.:.:|::||..||.|||..||||.|.|:|:|||.||.
 Frog   613 ITQGGIYMLQLVDNYAASYSLVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPSRFWKVCWAFVT 677

  Fly   528 PIFLLFITVYGLIGYEPLTYADYVYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSLRQRFTI 592
            |..|.||..:....:||:||..|.||:|:..:||.:...||:.||.:.:.|:...||:..:|..:
 Frog   678 PTILTFILCFSFYQWEPMTYGSYHYPTWSMVMGWLMLACSVIWIPVMFVIKMYLAPGTFIERLKL 742

  Fly   593 LTTPWRD 599
            :.:|..|
 Frog   743 VCSPQPD 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 268/578 (46%)
slc6a5XP_031756248.1 SLC6sbd_GlyT2 183..779 CDD:271389 270/582 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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