DRSC/TRiP Functional Genomics Resources

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Protein Alignment DAT and slc6a4

DIOPT Version :10

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_017946918.1 Gene:slc6a4 / 100493853 XenbaseID:XB-GENE-22062972 Length:664 Species:Xenopus tropicalis


Alignment Length:587 Identity:308/587 - (52%)
Similarity:402/587 - (68%) Gaps:41/587 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALGQH 90
            ||||||.|:||||||||:||||.|||||||:||:|||||||:||.||.|.|||||||||||:||:
 Frog   112 ERETWSKKIDFLLSVIGYAVDLGNVWRFPYVCYQNGGGAFLIPYVIMAVFGGIPLFYMELAMGQY 176

  Fly    91 NRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIWNTP 155
            :|.|.|:.|.::.|||||||||:.:||.||.||||.|:||:|.:...||.:.||||||.|.|||.
 Frog   177 HRNGCISIWRKICPLFKGIGYAICMIALYVAFYYNTIMAWALYYLIFSFRSELPWTSCLNEWNTG 241

  Fly   156 NCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAASEYFNRYI 220
            ||.              ||                      ...|:||......|.|.|::.|.:
 Frog   242 NCT--------------NY----------------------FQNSSVGWSNSSISPAEEFYTRLV 270

  Fly   221 LELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIRGLT 285
            |::::|:|:||||.|.|.:.||||:::.:.|||:|||:.|||||||.||.|||.||.:|||||.|
 Frog   271 LQIHKSKGLHDLGGISWQLTLCLLLIFTVVYFSIWKGVKTSGKVVWVTATFPYIVLALLLIRGAT 335

  Fly   286 LPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALLTSF 350
            |||::.|:.:||.|::..:....||||||.|:|||||||||||||:|||||:|||.|:|||:||.
 Frog   336 LPGAWRGVLFYLQPDWEKLLTTAVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALITST 400

  Fly   351 INSATSFIAGFVIFSVLGYMAHTLGVRIEDVATE-GPGLVFVVYPAAIATMPASTFWALIFFMML 414
            :|..|||::|.|||:||||||....:.:.:||.: ||.|:|:.|..|||.||||||:|:|||:||
 Frog   401 VNCMTSFMSGLVIFTVLGYMAEMRNLDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLML 465

  Fly   415 LTLGLDSSFGGSEAIITALSDEFPKI-KRNRELFVAGLFSLYFVVGLASCTQGGFYFFHLLDRYA 478
            :||||||:|.|.|.:|||:.||||.| .:.|||||..|.|:.|:..|::.|.||.|...|.:.||
 Frog   466 ITLGLDSTFAGLEGVITAVLDEFPHIWGKRRELFVFLLISVCFLGALSTLTFGGAYMVKLFEEYA 530

  Fly   479 AGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFITVYGLIGYE 543
            .|.::|..||.|||||||.||.|:|..|:|:|:||.||.:|::||..:.|:|||||....:....
 Frog   531 TGPAVLTVVFLEAIAVSWFYGINQFCRDVREMLGFSPGWFWKICWVAICPLFLLFIICSFMSSPP 595

  Fly   544 PLTYADYVYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSLRQRFTILTTPWRDQQSMAMVLN 608
            .|...:|.||||...||:||..||.:.:||..::.|.|||||:::||....||   :.|..:.|.
 Frog   596 DLRLFNYQYPSWTVVLGYCIGTSSFICVPAYMVYLLTSTPGSIKERFLKSITP---EVSREIPLG 657

  Fly   609 GV 610
            |:
 Frog   658 GI 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 303/571 (53%)
slc6a4XP_017946918.1 5HT_transport_N 48..91 CDD:397524
SLC5-6-like_sbd 113..649 CDD:444915 304/574 (53%)
Blue background indicates that the domain is not in the aligned region.

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