DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAT and slc6a18

DIOPT Version :9

Sequence 1:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001108369.1 Gene:slc6a18 / 100141332 ZFINID:ZDB-GENE-080219-9 Length:618 Species:Danio rerio


Alignment Length:640 Identity:221/640 - (34%)
Similarity:310/640 - (48%) Gaps:134/640 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NDNNSISDERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFY 82
            ::.:|: .||..|..||.:||:.:||||.|.|:|||||||...||||||:||.|.||..|:||.|
Zfish     5 SETSSV-QERPKWDNKVQYLLTCVGFAVGLGNIWRFPYLCQIYGGGAFLIPYLIALVFEGLPLLY 68

  Fly    83 MELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTS 147
            :|||:||..|||:|..|..:.||..|:|.|.::::|.|..:||.|:||.|.:||.||.:.|||:.
Zfish    69 LELAIGQSLRKGSIGVWHSISPLLGGVGVASMVVSFLVGLFYNTILAWVLWYFFHSFEDPLPWSQ 133

  Fly   148 CNNIWNTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHVEGFQSAA 212
            |                    |:..|..                           |:||...|:.
Zfish   134 C--------------------PINDNLE---------------------------GYVEECVSST 151

  Fly   213 SEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLL 277
            ...:..|...||.|..|...|:::|.:.|||...:.|.|....:||.|.||.|:.||.|||.||.
Zfish   152 PVNYYWYRQTLNISPDIEQSGSLQWTLVLCLATAWSIVYICFIRGIETIGKAVYVTATFPYLVLT 216

  Fly   278 ILLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVY 342
            |.|:|.|||||:..|:||..||:::.:...:||:|||||:||||...||.|:|::|||...|:..
Zfish   217 IFLVRALTLPGATDGLQYLFTPDWTLLTNPQVWLDAATQIFFSLSLAFGGLIAFSSYNPKKNDCE 281

  Fly   343 KDALLTSFINSATSFIAGFVIFSVLGYMA------------------------------------ 371
            :|||....||||||..|...||::||:.|                                    
Zfish   282 RDALFVGIINSATSLYASIPIFAILGFKATSNFNSCVNSNILDLTNAFDIGDRNITIENYDSWLR 346

  Fly   372 ----------------HTLGVRIEDVATEGPGLVFVVYPAAIATMPASTFWALIFFMMLLTLGLD 420
                            |.:.....|.:..|.||.|:|:..|:..||.|..||::||:||.:|||.
Zfish   347 DLNASDPDRVSSLNLKHCVLKNFLDQSASGTGLAFIVFTEAVIEMPGSQVWAVLFFVMLFSLGLS 411

  Fly   421 SSFGGSEAIITALSD------EFPKIKRNRELFVAGLFSLYFVVGLASCTQGGFYFFHLLDRYAA 479
            |.||..|.::|.|.|      ..||     |:|...:..:.|:|.|......|.|:..:.:.|..
Zfish   412 SMFGNLEGVLTPLLDLHMVPRWMPK-----EIFTGLICVVNFLVALIFTLGSGNYWLEIFNSYVG 471

  Fly   480 GYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFITVYGLIGYEP 544
            ...:||..|||.|||...||..|||:||..|.|..|..:|:.||..::|:.||.:    |:.|..
Zfish   472 SVPLLVIAFFEIIAVVCFYGIKRFSDDIEQMTGRRPNLFWRCCWMGISPVMLLVV----LVAYVV 532

  Fly   545 LTYADY-VYPSWANAL------------GW----CIAGSS--VVMIPAVAIFKLL 580
            :....: .||:|....            .|    |:..||  |:.||.||:::|:
Zfish   533 VQVQKHPTYPAWNPQYENFPETEEKPYSTWVFSICVLLSSVPVISIPIVALYRLI 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 219/631 (35%)
slc6a18NP_001108369.1 SLC5-6-like_sbd 12..587 CDD:294310 219/630 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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