DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syn2 and SNTG2

DIOPT Version :9

Sequence 1:NP_788381.1 Gene:Syn2 / 36848 FlyBaseID:FBgn0034135 Length:519 Species:Drosophila melanogaster
Sequence 2:XP_016859850.1 Gene:SNTG2 / 54221 HGNCID:13741 Length:540 Species:Homo sapiens


Alignment Length:493 Identity:192/493 - (38%)
Similarity:294/493 - (59%) Gaps:27/493 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LRLNLTMELLSLQKLEVVTPSSCHPNGPPMESKERMVQITRQKQGGLGLSIKGGAEHKLPILISR 107
            :||.||.|:|::||.:||.....|..     ...|.|.:.||..||||||||||:||.:|::||:
Human    44 IRLKLTKEVLTIQKQDVVCVGGSHQG-----RNRRTVTLRRQPVGGLGLSIKGGSEHNVPVVISK 103

  Fly   108 IYKDQAADITGQLFVGDAIIKVNGEYITACPHDDAVNILRNAGDIVVLTVKHYRAATPFLQKQLT 172
            |::|||||.||.||||||:::|||.::....|::.|::||||||.|.:||::.|.|..||:..|.
Human   104 IFEDQAADQTGMLFVGDAVLQVNGIHVENATHEEVVHLLRNAGDEVTITVEYLREAPAFLKLPLG 168

  Fly   173 KDTPDSDNDVTCAELKADEGYKSSVNSGTISRSCSRPMSICSEP--EKRWTDVVAVPLMMAYVTR 235
            ...|.||:....:....|.|...:.||.|.:.| |....|..:|  ||||.|.::|||.||.::|
Human   169 SPGPSSDHSSGASSPLFDSGLHLNGNSSTTAPS-SPSSPIAKDPRYEKRWLDTLSVPLSMARISR 232

  Fly   236 YIYGTDKLRQNAFEVRGLNGISTGVIHCDELAILSQWLKLITDNVVGLTHLQMKLYNRNFAVGER 300
            |..||:|||.|||||..|:|:|:|::........:.||:.::.|:..||...||:.|:..:..::
Human   233 YKAGTEKLRWNAFEVLALDGVSSGILRFYTAQDGTDWLRAVSANIRELTLQNMKMANKCCSPSDQ 297

  Fly   301 IEYMGWVNEGVINNNISWQSYKPRFLLLKGTEVMLFETPPLNVAGISKALVVYKVYQTMFRI--- 362
            :.:||||||.:...:.| |:::|:||.|||....:|.|||::.....:|...|.:.:.:|::   
Human   298 VVHMGWVNEKLQGADSS-QTFRPKFLALKGPSFYVFSTPPVSTFDWVRAERTYHLCEVLFKVHKF 361

  Fly   363 ---------------VKESETVDSRQHCFLLQSSGHEPRYLSVETRQELLRIENSWNAAIVTSVI 412
                           :::.:..|.|.:||.:.:...:....:||...||...|.|:..|....|.
Human   362 WLTEDCWLQANLYLGLQDFDFEDQRPYCFSIVAGHGKSHVFNVELGSELAMWEKSFQRATFMEVQ 426

  Fly   413 KLGRKTFAVSHHGKSGGLTLDWQAGFSLTEGAESATVWQYKFSQLRGSSDDGKSKLKLHFQDHDS 477
            :.|.:|:..|..|:....|:|:..||:..|......:|::|||||:|||||||:::||.||:.|:
Human   427 RTGSRTYMCSWQGEMLCFTVDFALGFTCFESKTKNVLWRFKFSQLKGSSDDGKTRVKLLFQNLDT 491

  Fly   478 RAIETKELECQVLQSLLFCMHAFLTAKVASVDPAFLSS 515
            :.|||||||.|.|:::|.|:|:|:.||||||||.|:.|
Human   492 KQIETKELEFQDLRAVLHCIHSFIAAKVASVDPGFMDS 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syn2NP_788381.1 PDZ_signaling 76..158 CDD:238492 46/81 (57%)
PH 301..407 CDD:214574 31/123 (25%)
SNTG2XP_016859850.1 PDZ_signaling 73..154 CDD:238492 46/80 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143877
Domainoid 1 1.000 235 1.000 Domainoid score I2371
eggNOG 1 0.900 - - E1_KOG3549
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 353 1.000 Inparanoid score I2256
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46473
OrthoDB 1 1.010 - - D1103724at2759
OrthoFinder 1 1.000 - - FOG0003391
OrthoInspector 1 1.000 - - otm40572
orthoMCL 1 0.900 - - OOG6_106123
Panther 1 1.100 - - LDO PTHR10554
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4001
SonicParanoid 1 1.000 - - X2288
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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