DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syn2 and SNTG1

DIOPT Version :9

Sequence 1:NP_788381.1 Gene:Syn2 / 36848 FlyBaseID:FBgn0034135 Length:519 Species:Drosophila melanogaster
Sequence 2:NP_001274742.1 Gene:SNTG1 / 54212 HGNCID:13740 Length:517 Species:Homo sapiens


Alignment Length:496 Identity:197/496 - (39%)
Similarity:294/496 - (59%) Gaps:12/496 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KVRTGMVHVSDGKSRPEPLRLNLTMELLSLQKLEVVTPSSCHPNGPPMESKERMVQITRQKQGGL 89
            :.:||:..:.||...|..:||:|..::|.:|:.:|:..|     |.|..|.||.|.|.||..||.
Human     9 ETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVS-----GEPFYSGERTVTIRRQTVGGF 68

  Fly    90 GLSIKGGAEHKLPILISRIYKDQAADITGQLFVGDAIIKVNGEYITACPHDDAVNILRNAGDIVV 154
            ||||||||||.:|:::|:|.|:|.|:::|.||:||||:::||..:..|.|::.|.:|||||:.|.
Human    69 GLSIKGGAEHNIPVVVSKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVT 133

  Fly   155 LTVKHYRAATPFLQKQLTKD---TPDSDNDVTCAELKADEGYKSSVN-SGTISRSCSR-PMSICS 214
            |||...:.|..||:..|.:|   .|...:..|.:.| .|.|...:.: :.|.:.|||. |.|...
Human   134 LTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPL-CDSGLHLNYHPNNTDTLSCSSWPTSPGL 197

  Fly   215 EPEKRWTDVVAVPLMMAYVTRYIYGTDKLRQNAFEVRGLNGISTGVIHCDELAILSQWLKLITDN 279
            ..||||.|:..:||:.:..::|:.|||..|||||:|..::|:.||:|.|........||:.|..|
Human   198 RWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCTGIIQCLSAEDCVDWLQAIATN 262

  Fly   280 VVGLTHLQMKLYNRNFAVGERIEYMGWVNEGVINNNISWQSYKPRFLLLKGTEVMLFETPPLNVA 344
            :..||...:|..||||.|.::|.||||. |....:.:..:.|.|.||.|:|:.:..|..||:...
Human   263 ISNLTKHNIKKINRNFPVNQQIVYMGWC-EAREQDPLQDRVYSPTFLALRGSCLYKFLAPPVTTW 326

  Fly   345 GISKALVVYKVYQTMFRIVKESETVDSRQHCFLLQSSGHEPRYLSVETRQELLRIENSWNAAIVT 409
            ..::|...:.||:.|.:|:|:|:.:|.|:.||.:||...|..|.|||...:|.:.|.::..|...
Human   327 DWTRAEKTFSVYEIMCKILKDSDLLDRRKQCFTVQSESGEDLYFSVELESDLAQWERAFQTATFL 391

  Fly   410 SVIKLGRKTFAVSHHGKSGGLTLDWQAGFSLTEGAESATVWQYKFSQLRGSSDDGKSKLKLHFQD 474
            .|.::..||:|........|||:|:..||...:.|..|.:|:||||||:|||||||||:|..||:
Human   392 EVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAVLWRYKFSQLKGSSDDGKSKIKFLFQN 456

  Fly   475 HDSRAIETKELECQVLQSLLFCMHAFLTAKVASVDPAFLSS 515
            .|::.||.||||...|.::|.|:|:|..||||.:||.||.:
Human   457 PDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLFLGN 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syn2NP_788381.1 PDZ_signaling 76..158 CDD:238492 44/81 (54%)
PH 301..407 CDD:214574 35/105 (33%)
SNTG1NP_001274742.1 PDZ_signaling 55..136 CDD:238492 43/80 (54%)
PH 191..259 CDD:214574 26/67 (39%)
PH 284..389 CDD:214574 35/105 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143876
Domainoid 1 1.000 235 1.000 Domainoid score I2371
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56834
Inparanoid 1 1.050 353 1.000 Inparanoid score I2256
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46473
OrthoDB 1 1.010 - - D1103724at2759
OrthoFinder 1 1.000 - - FOG0003391
OrthoInspector 1 1.000 - - otm40572
orthoMCL 1 0.900 - - OOG6_106123
Panther 1 1.100 - - O PTHR10554
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4001
SonicParanoid 1 1.000 - - X2288
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.900

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