DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syn2 and sntg1

DIOPT Version :10

Sequence 1:NP_788381.1 Gene:Syn2 / 36848 FlyBaseID:FBgn0034135 Length:519 Species:Drosophila melanogaster
Sequence 2:XP_002666738.3 Gene:sntg1 / 100330925 ZFINID:ZDB-GENE-140106-77 Length:525 Species:Danio rerio


Alignment Length:498 Identity:205/498 - (41%)
Similarity:306/498 - (61%) Gaps:12/498 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NLKVRTGMVHVSDGKSRPEPLRLNLTMELLSLQKLEVVTPSSCHPNGPPMESKERMVQITRQKQG 87
            |.:.:||:..:.||...|..:||:|..::|::|:.:|:..|     |.|..|.||.|.|.||..|
Zfish     7 NEETKTGIYLLQDGSEEPFNIRLHLAKDILTIQEQDVICVS-----GEPFYSSERTVTIRRQTIG 66

  Fly    88 GLGLSIKGGAEHKLPILISRIYKDQAADITGQLFVGDAIIKVNGEYITACPHDDAVNILRNAGDI 152
            |.|||||||||||:|::||:|.|:|.|:::|.||:||.|:::||..:.:..|::.|.:|||||:.
Zfish    67 GFGLSIKGGAEHKIPVVISKISKEQKAELSGLLFIGDGILQINGINVRSYRHEEVVQVLRNAGEE 131

  Fly   153 VVLTVKHYRAATPFLQKQLTKD---TPDSDNDVTCAELKADEGYKSSVN-SGTISRSCSR-PMSI 212
            |.|||...:....||:..|.:|   .|...:..|.:.| .|.|...:.: :.|.:.|||. |||.
Zfish   132 VTLTVSFLKRTPAFLKLPLCEDCSCIPSDQSSGTSSPL-CDSGLHLNYHPNNTDTLSCSSWPMSP 195

  Fly   213 CSEPEKRWTDVVAVPLMMAYVTRYIYGTDKLRQNAFEVRGLNGISTGVIHCDELAILSQWLKLIT 277
            ....||||.|:..:||:.|.:::|:.|||..|||||:|..::|:.:|||.|......:.||:.|:
Zfish   196 GLRWEKRWVDLRLIPLLHARLSQYVPGTDICRQNAFQVIAVDGVCSGVIQCPGTDECTDWLQAIS 260

  Fly   278 DNVVGLTHLQMKLYNRNFAVGERIEYMGWVNEGVINNNISWQSYKPRFLLLKGTEVMLFETPPLN 342
            .|:..||...:|..||||.|.::|.|||||:|.. .:::..:.|.|:||.|:|:.:..|..||:.
Zfish   261 ANISALTKHNVKKINRNFPVNQQIIYMGWVDEKE-QDSVQDRMYTPKFLALRGSSLFKFSAPPVT 324

  Fly   343 VAGISKALVVYKVYQTMFRIVKESETVDSRQHCFLLQSSGHEPRYLSVETRQELLRIENSWNAAI 407
            ....::|...:.||:.||:|:|:||.:|.|:|||.:|:...|..:.|||...|||..|.::..|.
Zfish   325 TWDWTRAEKSFTVYEIMFKILKDSELLDKRKHCFSVQTDSGEDIFFSVELECELLLWEKAFQMAT 389

  Fly   408 VTSVIKLGRKTFAVSHHGKSGGLTLDWQAGFSLTEGAESATVWQYKFSQLRGSSDDGKSKLKLHF 472
            ...|.::..||:|........|||:|:..||...:.|..|.:|:||||||:|||||||||:|..|
Zfish   390 FFEVERIQCKTYACIVDSHLMGLTIDFSMGFVCFDAASKAVLWRYKFSQLKGSSDDGKSKIKFLF 454

  Fly   473 QDHDSRAIETKELECQVLQSLLFCMHAFLTAKVASVDPAFLSS 515
            |:.|::.||.||||...|.::|.|:|||..||||.:||.|:||
Zfish   455 QNQDTKLIEAKELEFSNLFAVLHCIHAFFAAKVACLDPMFVSS 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syn2NP_788381.1 PDZ_syntrophin-like 77..159 CDD:467262 44/81 (54%)
PH 301..407 CDD:214574 39/105 (37%)
sntg1XP_002666738.3 PDZ_syntrophin-like 56..138 CDD:467262 44/81 (54%)

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