DRSC/TRiP Functional Genomics Resources

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Protein Alignment loopin-1 and zgc:152830

DIOPT Version :10

Sequence 1:NP_611134.1 Gene:loopin-1 / 36847 FlyBaseID:FBgn0259795 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001070088.1 Gene:zgc:152830 / 767682 ZFINID:ZDB-GENE-090312-55 Length:512 Species:Danio rerio


Alignment Length:574 Identity:121/574 - (21%)
Similarity:198/574 - (34%) Gaps:163/574 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RYATSCKSPK--GVVVGVYTKDGDK-PSKTTANAVTLDD------ALGGKLLTLIRERGMDGTPG 87
            ::.|.||...  |::  :.|::.:: |::.......|.|      .:..:::.|    .:.|.||
Zfish     9 QFTTDCKDQNFDGII--LITQNYEQLPNELECLKAPLQDYSAVDCCIKDEVVVL----RVPGLPG 67

  Fly    88 KGLLFS---GFEGEYQAVAVVGVGKQGAAYNENEELDEGME--------NVRVAAGTGARALQLQ 141
            ..|:.|   ....:|..|...   :..||......|..|::        |...|..|....|...
Zfish    68 NRLVCSCTGPVNRDYDDVRRF---RDAAANGIKRALKAGLQRPLLVCPPNSSYAKNTLVAVLGAL 129

  Fly   142 GMYEVHVDSMDYPEQAAEGAALAVWRYNANKRKKNRIQTPKLDMYGKGDRDAWVRGLFKAESQNL 206
            .:..|.::..::.....:.|.|.:|       .||:.|         ||      |:.:     |
Zfish   130 HVLYVPLEVREHKSSPHKVATLGIW-------VKNKEQ---------GD------GIIE-----L 167

  Fly   207 ARRL------------SDTPANMMTPSIFAQAAVDALCPCGVSVEVRSMDWIEDMNLNSF----- 254
            |..|            || |..|..|.: |:..........|.|.|.|       |||:.     
Zfish   168 ANALESGRFVYRDIGGSD-PERMAAPRV-AEYVQSVFKDSPVKVTVVS-------NLNTLEKEYP 223

  Fly   255 LMIAKGSCEPPL------LLECSYCGTTPEDRPVLLLGQGLTFHSGGLCLKPKTGMDQYRGAMAG 313
            .:.|...|...:      :::..|||..|.::.::|:|:|:|:.:||..:|....|....|...|
Zfish   224 CLAAVNRCANAVPRHQARVIKLQYCGEGPIEQTLMLVGKGITYDTGGADIKAGGIMAGMHGDKCG 288

  Fly   314 AAVCVGVLRAAAALSLP--LNITAVMPLCEHMPSGMAVKCGDVVTLLNGTTMGIKNVD------- 369
            :|...|..:..|.|. |  |.:...|.:..:..........::|....|..:.:.|.|       
Zfish   289 SAAVAGFFQILAKLK-PKHLKVVGAMAMVRNSVGSDCYVADELVVSRAGRRIRVGNTDAEGRMVM 352

  Fly   370 -------KAPVVQLADPLLYAQATYKPKLVIDIGTVAMGVNYAV---GGGASGLWTTSKSVWQNF 424
                   |...:|...|.|:..||.....:     .|||..|::   .|.|.......:  ||  
Zfish   353 VDLLCEMKEQALQEVSPHLFTIATLTGHAI-----RAMGPKYSIIMDNGAARRAGNDLE--WQ-- 408

  Fly   425 RKSGGLTGDRVWRFPLFKY----------------YKQIVNKNITYDLCNTGRG---PASSCLAA 470
             |:|.:.||      ||:.                |:.|:..| ......|.||   ||:..:.|
Zfish   409 -KAGEVLGD------LFEVSTIRREDYEFHKGKSEYEDILQAN-NLPSSATPRGHQTPAAFLIMA 465

  Fly   471 AIL--HTLVPCAE---WAHLDIRGTGMTTTINPRPYLLKDSMTGRPTRTVIQFM 519
            :.|  |. |..|:   ::|:||.|:.     .|.|        |.||...|..|
Zfish   466 SGLDQHG-VDSAKPQPYSHIDIAGSS-----GPFP--------GVPTGAPILAM 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loopin-1NP_611134.1 Peptidase_M17_N 44..173 CDD:426984 24/146 (16%)
Peptidase_M17 206..514 CDD:459978 85/373 (23%)
zgc:152830NP_001070088.1 Peptidase_M17 20..502 CDD:238247 116/558 (21%)

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