DRSC/TRiP Functional Genomics Resources

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Protein Alignment loopin-1 and lap3

DIOPT Version :10

Sequence 1:NP_611134.1 Gene:loopin-1 / 36847 FlyBaseID:FBgn0259795 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001108319.2 Gene:lap3 / 562854 ZFINID:ZDB-GENE-060719-1 Length:517 Species:Danio rerio


Alignment Length:525 Identity:206/525 - (39%)
Similarity:292/525 - (55%) Gaps:29/525 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RAGLRMVRQNR----SGQSVIPSYRRYATSCKSPKGVVVGVYTK--DGDKPSKTTANAVTLDDAL 69
            ||.|..:|::.    |..:|..|.|         ||:|:|||.:  |.|..|.|.| |...|.:|
Zfish     7 RALLTAIRKHNCRLFSDSTVTSSTR---------KGLVLGVYEQQSDSDGVSLTEA-AAAFDRSL 61

  Fly    70 GGKLLTLIRERGMDGTPGKGLLFSGFEGEYQAVAVVGVGKQGAAYNENEELDEGMENVRVAAGTG 134
            .|:|..::...|.....||..:|.|...::.:|.|||:||........|..|...||:|.|...|
Zfish    62 SGRLSEMLLLSGPPLKRGKSRIFYGLHQDFPSVVVVGLGKSDPGVCGKENWDNCKENIRAAVSAG 126

  Fly   135 ARALQLQGMYEVHVDSMDYPEQAAEGAALAVWRYNANK-RKKNRIQTPKLDMYGKGDRDAWVRGL 198
            .|.||...:..|.||.....:.|||||.|.::.|:..| :||.|::|..   :|..|..||.:|:
Zfish   127 CRQLQDLEVAHVEVDPCGDDQSAAEGAVLGLFEYDELKTKKKVRVKTRP---HGSVDAAAWQKGV 188

  Fly   199 FKAESQNLARRLSDTPANMMTPSIFAQAAVD--ALCPCGVSVEVRSMDWIEDMNLNSFLMIAKGS 261
            ...:.|||||:|.:.|||.:||::||.....  :|....|.|..|...|||...:.:||.::|||
Zfish   189 LYGDGQNLARQLMEAPANHVTPTVFANTIEQKLSLFADRVIVHKRPQSWIEGEQMGAFLSVSKGS 253

  Fly   262 CEPPLLLECSYCGTTPEDR-PVLLLGQGLTFHSGGLCLKPKTGMDQYRGAMAGAAVCVGVLRAAA 325
            .|||:.||..|.|::...: |::|:|:|:||.|||:.|||.:|||..|..|.|||.....:..||
Zfish   254 EEPPIFLELHYKGSSDSAQPPLVLVGKGITFDSGGISLKPSSGMDAMRADMGGAATVCSAIVTAA 318

  Fly   326 ALSLPLNITAVMPLCEHMPSGMAVKCGDVVTLLNGTTMGIKNVDKAPVVQLADPLLYAQATYKPK 390
            ||.:|:||..:.||||:||||.|.|.||||...||.|:.|.|.|....:.|||.|.||. ::||:
Zfish   319 ALKIPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQIDNTDAEGRLILADALCYAH-SFKPR 382

  Fly   391 LVIDIGTVAMGVNYAVGGGASGLWTTSKSVWQNFRKSGGLTGDRVWRFPLFKYYKQIVNKNITYD 455
            .:|:..|:...::.|:|..|:|::|.|..:|:...|:..:|||||||.|||::|.:.|..:...|
Zfish   383 AIINAATLTGAMDVALGSAATGVFTNSDWLWERLHKASVVTGDRVWRMPLFQHYTKQVTDSALAD 447

  Fly   456 LCNTGRGPAS--SCLAAAILHTLVPCAEWAHLDIRGTGMTTTINPRPYLLKDSMTGRPTRTVIQF 518
            |.|.|:...|  :|.|||.|...|....||||||  .|:.|..:..|||.| .|:||||||:::|
Zfish   448 LNNVGKYSRSGGACTAAAFLREFVSADHWAHLDI--AGVMTNKDEIPYLRK-GMSGRPTRTLVEF 509

  Fly   519 MYQMA 523
            ...:|
Zfish   510 AAGLA 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loopin-1NP_611134.1 Peptidase_M17_N 44..173 CDD:426984 46/131 (35%)
Peptidase_M17 206..514 CDD:459978 135/312 (43%)
lap3NP_001108319.2 None

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