DRSC/TRiP Functional Genomics Resources

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Protein Alignment loopin-1 and ysp2

DIOPT Version :10

Sequence 1:NP_611134.1 Gene:loopin-1 / 36847 FlyBaseID:FBgn0259795 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_592993.1 Gene:ysp2 / 2542130 PomBaseID:SPAC13A11.05 Length:513 Species:Schizosaccharomyces pombe


Alignment Length:431 Identity:141/431 - (32%)
Similarity:213/431 - (49%) Gaps:36/431 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 ELDEGM--ENVRVAAGTGARALQLQGMYEVHVDSMDYPEQAAEGAALAVWRYNANK--------- 172
            :|:|.:  ::||.||...|:.|:..|...:.||.|.:|:.||.|||||.:.::..:         
pombe    82 QLEENVSEKSVRSAAAEAAKILKSNGAKSIAVDGMGFPKDAALGAALATYDFSLRRDHLSVYQDE 146

  Fly   173 ---RKKNRIQTPKLDMY-------------GKGDRDAWVRGLFKAESQNLARRLSDTPANMMTPS 221
               .|:|...:|..:..             ...:.:|:..||.:|.:|||||.|.:.|||.||..
pombe   147 KVVEKENLFTSPAPERLTFQLLSNTSEKKTATAEENAFKVGLIEAAAQNLARSLMECPANYMTSL 211

  Fly   222 IFAQAAVDALCPCG-VSVEVRSMDWIEDMNLNSFLMIAKGSCEPPLLLECSYCG--TTPEDRPVL 283
            .|...|.:...... |.|.|....||::..:|..|.:..||..||..||..|.|  .:.:|..:.
pombe   212 QFCHFAQELFQNSSKVKVFVHDEKWIDEQKMNGLLTVNAGSDIPPRFLEVQYIGKEKSKDDGWLG 276

  Fly   284 LLGQGLTFHSGGLCLKPKTGMDQYRGAMAGAAVCVGVLRAAAALSLPLNITAVMPLCEHMPSGMA 348
            |:|:|:||.|||:.:||...|.:.|..|.||||.:..:.|...||:|:|...|.||.|::|||.|
pombe   277 LVGKGVTFDSGGISIKPSQNMKEMRADMGGAAVMLSSIYALEQLSIPVNAVFVTPLTENLPSGSA 341

  Fly   349 VKCGDVVTLLNGTTMGIKNVDKAPVVQLADPLLYAQATYKPKLVIDIGTVAMGVNYAVGGGASGL 413
            .|.|||:.:.||.::.|.|.|....:.|||.:.|..:.||.|.||:..|:...:..|:|...:|.
pombe   342 AKPGDVIFMRNGLSVEIDNTDAEGRLILADAVHYVSSQYKTKAVIEASTLTGAMLVALGNVFTGA 406

  Fly   414 WTTSKSVWQNFRKSGGLTGDRVWRFPLFKYYKQIVNKNITYDLCNTGRGPASSCLAAAILHTLVP 478
            :...:.:|:|...:....||..||.|..:.|.:.:..:...||||..|.....|.|||.:...:.
pombe   407 FVQGEELWKNLETASHDAGDLFWRMPFHEAYLKQLTSSSNADLCNVSRAGGGCCTAAAFIKCFLA 471

  Fly   479 CAE--WAHLDIRGTGMTTTINPRPYLLKDSMTGRPTRTVIQ 517
            ..:  :|||||.|. |...:|....   |.|:|||.||:|:
pombe   472 QKDLSFAHLDIAGV-MDKQLNSWDC---DGMSGRPVRTIIE 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loopin-1NP_611134.1 Peptidase_M17_N 44..173 CDD:426984 20/67 (30%)
Peptidase_M17 206..514 CDD:459978 109/312 (35%)
ysp2NP_592993.1 Peptidase_M17 31..508 CDD:238247 140/429 (33%)

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