DRSC/TRiP Functional Genomics Resources

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Protein Alignment loopin-1 and lap-1

DIOPT Version :10

Sequence 1:NP_611134.1 Gene:loopin-1 / 36847 FlyBaseID:FBgn0259795 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_498854.1 Gene:lap-1 / 176185 WormBaseID:WBGene00002249 Length:491 Species:Caenorhabditis elegans


Alignment Length:491 Identity:124/491 - (25%)
Similarity:194/491 - (39%) Gaps:99/491 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ALGGKLLTLIRERGMDGTPGKGLLFSG--FEGEYQAVAVVGVGKQGAAYNE-------------N 117
            |:|..|.:||       ..||..:...  |||:::.||...| ..|.::|.             :
 Worm    12 AVGDGLTSLI-------IVGKKSVLKNVTFEGKFKEVAQKFV-TDGDSWNSMISRIPASGRHPLH 68

  Fly   118 EELDEGMENVRVAAGTGARALQLQGMYE-------------VH-VDSMDYPEQAAEGAALAVWRY 168
            .||.. :..|..|:..|........:|:             || |...:||:..:..||:|    
 Worm    69 YELAH-LITVPDASSRGNTPTNAHSIYKELKPINYPEDTKNVHFVLFAEYPDVLSHVAAIA---- 128

  Fly   169 NANKRKKNRIQT-PKLDMYGKGDRDAWVR------------GLF---KAESQNLARRLSDTPANM 217
                      :| .|..|...|.|:..|.            .:|   .:||.....||.|||||:
 Worm   129 ----------RTFCKFSMKTSGIRELNVNIDVVCDKLTNEDAVFLTDLSESVRETARLIDTPANI 183

  Fly   218 MTPSIFAQAAVDALCPCGVSVEVRSMDWIEDMNLNSFLMIAKGSCEPPLLLECSY--CGTTPEDR 280
            :|.......||......|..:.|...:.:..........:.|....||..:..|:  .|:|..  
 Worm   184 LTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGSTEH-- 246

  Fly   281 PVLLLGQGLTFHSGGLCLKPKTGMDQYRGAMAGAAVCVGVLRAAAAL---SLPLNITAVMPLCEH 342
             :.|:|:|:.:.:|||.:|.||||...:..|.|||   |:|.|.:||   .....:.|.:.:.|:
 Worm   247 -IALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAA---GMLEAYSALVKHGFSQTLHACLCIVEN 307

  Fly   343 MPSGMAVKCGDVVTLLNGTTMGIKNVDKAPVVQLADPLLYAQATYKPKLVIDIGTVAMGVNYAVG 407
            ..|.:|.|..|::.:|:|.|:.|.|.|....:.|||.:.||:.|.|...:.|:.|:. |....:.
 Worm   308 NVSPIANKPDDIIKMLSGKTVEINNTDAEGRLILADGVFYAKETLKATTIFDMATLT-GAQAWLS 371

  Fly   408 GGASGLWTTSKSVWQN-FRKSGGLTGDRV--WRFPLFKYYKQIVNKNITYDLCNTGRGPAS---S 466
            |...|...|:....:| ..|:|..:||.|  ..|....::..:  |:...|:.|:..|...   |
 Worm   372 GRLHGAAMTNDEQLENEIIKAGKASGDLVAPMLFAPDLFFGDL--KSSIADMKNSNLGKMDGPPS 434

  Fly   467 CLAAAILHTLVPCAE---WAHLDI--------RGTG 491
            .:|...:...:...|   |.||||        ||||
 Worm   435 AVAGLFIGAHIGFGEGLRWLHLDIAAPAEVGDRGTG 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loopin-1NP_611134.1 Peptidase_M17_N 44..173 CDD:426984 29/133 (22%)
Peptidase_M17 206..514 CDD:459978 86/308 (28%)
lap-1NP_498854.1 Peptidase_M17 35..480 CDD:238247 116/461 (25%)

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