Sequence 1: | NP_477507.1 | Gene: | Sema2a / 36846 | FlyBaseID: | FBgn0011260 | Length: | 724 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005162676.1 | Gene: | sema5a / 561295 | ZFINID: | ZDB-GENE-030131-8969 | Length: | 1078 | Species: | Danio rerio |
Alignment Length: | 793 | Identity: | 238/793 - (30%) |
---|---|---|---|
Similarity: | 349/793 - (44%) | Gaps: | 197/793 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 ERPCCTGNDQGNNNYGKHGADH-----------VREFNC-GKLYYRTFHMNEDRDTLYVGAMDRV 88
Fly 89 FRVNLQNIS-----SSNCNRDVINLEPTRDDVVSCVSKGKSQIFDCKNHVRVIQSMDQGDRLYVC 148
Fly 149 GTNAHNPKDYVIYAN--LTHLPRSEYVIGVGLGIAKCPYDPLDNSTAIYVENGNPGGLPGLYSGT 211
Fly 212 NAEFTKADTVIFRT-----DLYNTSAKRLEYKFKRTLKYDSKWLDKPNFVGSFDIGEYVYFFFRE 271
Fly 272 TAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKARLNCSISGEFPFYFNEIQSVYQLPS 336
Fly 337 DKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPEPRP----- 396
Fly 397 ----GTCVNDTS-NLPDTVLNFIRSHPLMDKAVNHEHNNPV-YYKRDLV-FTKLVVDKIR-IDIL 453
Fly 454 NQEYIVYYVGTNLGRIYKIVQ--YYRNGESLSKLLDIFEVAPNEAIQVMEISQTRKSLYIGTDHR 516
Fly 517 IKQIDLAMCN--RRYDNCFRCVRDPYCGWDKEANTCRPYELDLLQD----------VANETSD-- 567
Fly 568 --------------------------ICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVT-- 604
Fly 605 --WYHHSKDKG-RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDC--HL--------------- 649
Fly 650 ------GGSLLCSYNITVDAHRCTPPNKSNDYQKIYSDWCHEFEKYKTAMKSWEKKQAQCSTRQN 708
Fly 709 FSSN-QHPNEIFR 720 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2a | NP_477507.1 | Sema_2A | 66..523 | CDD:200499 | 173/483 (36%) |
Ig_Semaphorin_C | 573..664 | CDD:143180 | 21/118 (18%) | ||
sema5a | XP_005162676.1 | Sema | 58..492 | CDD:301699 | 175/488 (36%) |
PSI | 494..541 | CDD:279745 | 13/47 (28%) | ||
TSP1 | 552..603 | CDD:214559 | 7/56 (13%) | ||
TSP1 | 606..659 | CDD:214559 | 14/55 (25%) | ||
TSP1 | 664..710 | CDD:214559 | 6/47 (13%) | ||
TSP1 | 792..844 | CDD:214559 | |||
TSP1 | 849..901 | CDD:214559 | |||
TSP_1 | 905..945 | CDD:278517 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R9633 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |