Sequence 1: | NP_477507.1 | Gene: | Sema2a / 36846 | FlyBaseID: | FBgn0011260 | Length: | 724 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038937516.1 | Gene: | Sema3f / 315996 | RGDID: | 1308514 | Length: | 802 | Species: | Rattus norvegicus |
Alignment Length: | 683 | Identity: | 204/683 - (29%) |
---|---|---|---|
Similarity: | 315/683 - (46%) | Gaps: | 136/683 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 GADHVREFNCGKLYYRTFHMNEDRDTLYVGAMDRVFRVNLQNISSSNCNRD--VINLEPTRDDVV 116
Fly 117 SCVSKGKSQIFDCKNHVRVIQSMDQGDRLYVCGTNAHNPKDYVIYAN---------LTHL----- 167
Fly 168 ----------------PRSEYVI-----GVGLGIAKCPYDP-LDNSTAIYVENGNPGGLPGLYSG 210
Fly 211 TNAEFTKADTVIFRTDLYNTSAKRLEYKFKRTLKYDSKWLDKPNFVGSFDI-------GEYVYFF 268
Fly 269 FRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKARLNCSISGE--FPFYFNEIQSV 331
Fly 332 YQLPSDKSR---FFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPE 393
Fly 394 PRPGTC--------VNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNPVYYKRDLVF--TKLVVDKI 448
Fly 449 RIDILNQEYIVYYVGTNLGRIYKIVQYYRNGESLSKLL----DIF-EVAPNEAIQVMEISQTRKS 508
Fly 509 LYIGTDHRIKQIDLAMCNRRYDNCFRC--VRDPYCGWDKEANTCRPY-----ELDLLQDV----- 561
Fly 562 --------ANETSDICDSSVLKKKIVVTY---GQSVHLGCFVKIPEVLKNEQVTW-YHHSKDKGR 614
Fly 615 YEIRYSPTKYIETTERGLVVVSVNEADGGRYDC 647 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2a | NP_477507.1 | Sema_2A | 66..523 | CDD:200499 | 162/521 (31%) |
Ig_Semaphorin_C | 573..664 | CDD:143180 | 20/79 (25%) | ||
Sema3f | XP_038937516.1 | Sema_3F | 65..565 | CDD:200515 | 164/530 (31%) |
PSI | 564..601 | CDD:214655 | 13/38 (34%) | ||
Ig_Sema3 | 625..714 | CDD:409455 | 21/85 (25%) | ||
Ig strand B | 639..643 | CDD:409455 | 1/3 (33%) | ||
Ig strand C | 651..655 | CDD:409455 | 1/3 (33%) | ||
Ig strand E | 678..682 | CDD:409455 | 2/3 (67%) | ||
Ig strand F | 692..697 | CDD:409455 | 2/4 (50%) | ||
Ig strand G | 709..712 | CDD:409455 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I11361 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X596 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.910 |