Sequence 1: | NP_477507.1 | Gene: | Sema2a / 36846 | FlyBaseID: | FBgn0011260 | Length: | 724 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_059006.1 | Gene: | Sema3a / 29751 | RGDID: | 3657 | Length: | 772 | Species: | Rattus norvegicus |
Alignment Length: | 654 | Identity: | 215/654 - (32%) |
---|---|---|---|
Similarity: | 324/654 - (49%) | Gaps: | 104/654 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 55 ADHVREFN--CGKLYYRTFHMNEDRDTLYVGAMDRVFRVNLQNISSSNCNRDVINLEPTRDDVVS 117
Fly 118 CVSKGKSQIFDCKNHVRVIQSMDQGDRLYVCGTNA-----------HNPKDYVIYANLTHLPRSE 171
Fly 172 YVIGVGLGIAKCPYDPLDNSTAIYVENGNPGGLPGLYSGTNAEFTKADTVIFRTDLYNTSAKRLE 236
Fly 237 YKFKRTLKYDSKWLDKPNFVGSFDIGE-------YVYFFFRETAVEYINCGKAVYSRIARVCKKD 294
Fly 295 VGGKNLLAHNWATYLKARLNCSISGE--FPFYFNEIQSVYQLPSDKSR---FFATFTTSTNGLIG 354
Fly 355 SAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPEPRPGTC-------VNDTSNLPDTVLN 412
Fly 413 FIRSHPLMDKAVNHEHNNPVYYKRDL--VFTKLVVDKIRIDILNQEYIVYYVGTNLGRIYKIVQ- 474
Fly 475 ----YYRNGESLSKLLDIFEVAPNEAIQVMEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFRC 535
Fly 536 --VRDPYCGWDKEANTCRPY-----ELDLLQDVAN----------ETSDICDSSVLKKKIVVTYG 583
Fly 584 ---QSVHLGCFVKIPEVLKNEQVTWYHHSKDKGR-YEIRYSPTKYIETTERGLVVVSVNEADGGR 644
Fly 645 YDCH 648 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2a | NP_477507.1 | Sema_2A | 66..523 | CDD:200499 | 169/493 (34%) |
Ig_Semaphorin_C | 573..664 | CDD:143180 | 26/80 (33%) | ||
Sema3a | NP_059006.1 | Sema_3A | 26..518 | CDD:200510 | 173/509 (34%) |
PSI | 516..>552 | CDD:214655 | 12/37 (32%) | ||
Ig_Sema3 | 580..671 | CDD:409455 | 26/80 (33%) | ||
Ig strand B | 594..598 | CDD:409455 | 1/3 (33%) | ||
Ig strand C | 606..610 | CDD:409455 | 2/7 (29%) | ||
Ig strand E | 633..637 | CDD:409455 | 2/3 (67%) | ||
Ig strand F | 647..652 | CDD:409455 | 3/5 (60%) | ||
Ig strand G | 664..667 | CDD:409455 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 677..698 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 729..772 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I11361 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H31358 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D153798at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm45857 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.920 |