Sequence 1: | NP_477507.1 | Gene: | Sema2a / 36846 | FlyBaseID: | FBgn0011260 | Length: | 724 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006525789.1 | Gene: | Sema6a / 20358 | MGIID: | 1203727 | Length: | 1048 | Species: | Mus musculus |
Alignment Length: | 600 | Identity: | 202/600 - (33%) |
---|---|---|---|
Similarity: | 306/600 - (51%) | Gaps: | 84/600 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LLALLLLLCSSVSETAADYE----NTWNFYYERPCCTGNDQGNNNYGKHGADHVREFNCGKLYYR 69
Fly 70 TFHMNEDRDTLYVGAMDRVFRVNLQNISSSN--CNRDVINLEPTRDDVVSCVSKGKSQIFDCKNH 132
Fly 133 VRVIQSMDQGDRLYVCGTNAHNP--KDYVIYANLTHLPRSEYVIGVGLGIAKCPYDPLDNSTAIY 195
Fly 196 VENGNPGGLPGLYSGTNAEFTKADTVIFRTDLYNTSAKRLEYKFKRTLKYDSKWLDKPNFVGSFD 260
Fly 261 IGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGG-KNLLAHNWATYLKARLNCSISGEFPFY 324
Fly 325 FNEIQSVYQLPSDKSR--FFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVL 387
Fly 388 NSRVPEPRPGTCVND-------TSN-LPDTVLNFIRSHPLMDKAVNHEHNNPVYYKRDLV---FT 441
Fly 442 KLVVDKIRIDILNQEYIVYYVGTNLGRIYKIV-----QYYRNGESLSKLLDI-------FEVAPN 494
Fly 495 EAIQVMEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR-CV--RDPYCGWDKEANTCRPY--- 553
Fly 554 -ELDLLQDVANETSD 567 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2a | NP_477507.1 | Sema_2A | 66..523 | CDD:200499 | 169/486 (35%) |
Ig_Semaphorin_C | 573..664 | CDD:143180 | |||
Sema6a | XP_006525789.1 | Sema_6A | 48..513 | CDD:200527 | 172/505 (34%) |
PSI | 514..>546 | CDD:366642 | 13/32 (41%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |