Sequence 1: | NP_477507.1 | Gene: | Sema2a / 36846 | FlyBaseID: | FBgn0011260 | Length: | 724 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001268809.1 | Gene: | Sema4d / 20354 | MGIID: | 109244 | Length: | 861 | Species: | Mus musculus |
Alignment Length: | 726 | Identity: | 221/726 - (30%) |
---|---|---|---|
Similarity: | 340/726 - (46%) | Gaps: | 139/726 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 LALLLLLCSSVSETAADYENTWNFYYERPCCTGNDQGNNNYGKHGADHVREFN-CGKLYYRTFHM 73
Fly 74 NEDRDTLYVGAMDRVFRVNLQNISSSNCNRDVINLEPTRDDVVSCVSKGKSQIFDCKNHVRVIQS 138
Fly 139 MDQGDRLYVCGTNAHNPK-DYVIYANLTHLPRSEYVIGVGLGIAKCPYDPLDNSTAIYVENGNPG 202
Fly 203 GLPGLYSGTNAEFTKADTVIFRTDLYNTSAKRLEYKFKRTLKYDSKWLDKPNFV----------G 257
Fly 258 SFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKARLNCSISGEFP 322
Fly 323 FYFNEIQSVYQL--PSDKSR-FFATFTTSTNGLIGSAVCSFHINEIQAAFN-GKFKEQSS---SN 380
Fly 381 SAWLPVLNSRVPEPRPGTCV-------NDTS--NLPDTVLNFIRSHPLMDKAVNHEHNNPVYYKR 436
Fly 437 DLVFTKLVVDKIR-IDILNQEYIVYYVGTNLGRIYKIV------------QYYRNGESLSKLLDI 488
Fly 489 FEVAPNEAIQVMEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFRCV--RDPYCGWDKEANTCR 551
Fly 552 PYELD------LLQDVANETSDICDSSVLKKKI---VVTYGQSVHLGCFVKIPEVLKN-EQVTWY 606
Fly 607 HHSKDKGRYEIRYSPTKYIETTERGLVVVSVNEADGGRYDC--------HLGGSLLCSYNITVDA 663
Fly 664 HRCTPPNKSND 674 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2a | NP_477507.1 | Sema_2A | 66..523 | CDD:200499 | 167/496 (34%) |
Ig_Semaphorin_C | 573..664 | CDD:143180 | 20/102 (20%) | ||
Sema4d | NP_001268809.1 | Sema_4D | 31..501 | CDD:200520 | 173/533 (32%) |
PSI | 503..548 | CDD:396154 | 13/45 (29%) | ||
Ig | 563..646 | CDD:416386 | 18/92 (20%) | ||
Ig strand B | 569..577 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 583..589 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 591..594 | CDD:409353 | 0/7 (0%) | ||
Ig strand D | 600..604 | CDD:409353 | 2/3 (67%) | ||
Ig strand E | 607..614 | CDD:409353 | 1/6 (17%) | ||
Ig strand F | 620..629 | CDD:409353 | 3/8 (38%) | ||
Ig strand G | 633..646 | CDD:409353 | 2/12 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 649..709 | 3/11 (27%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 793..839 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.870 |