DRSC/TRiP Functional Genomics Resources

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Protein Alignment knon and Atp5pdl1

DIOPT Version :10

Sequence 1:NP_611133.1 Gene:knon / 36845 FlyBaseID:FBgn0285943 Length:734 Species:Drosophila melanogaster
Sequence 2:XP_017450045.2 Gene:Atp5pdl1 / 688022 RGDID:1593640 Length:151 Species:Rattus norvegicus


Alignment Length:141 Identity:36/141 - (25%)
Similarity:62/141 - (43%) Gaps:25/141 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 HEEYKDRVRKYPESMPTIDWEYYRQN-VREEFVDWVKGYETKYDKLHSVFENRHAIVDHKRYFEL 113
            :|.:..|:....|..|..||.||:.| .:....|   .:..|::.|       ...|...:|..|
  Rat    35 NETFHTRLASLSEEPPATDWAYYKANGAKAGLAD---DFAKKFNAL-------KIPVPEDKYTAL 89

  Fly   114 VDEEKKVVTKCISEYKAESDKRIQELTEKLEFVKAMRPYSEMTMEEFCFARPHLAPDFINKPTFW 178
            ||.|::...|..:::.:....||||..::||.:|:|.|:.:||            ||.:|:  .:
  Rat    90 VDTEEREGVKNCAQFVSGFQARIQEYEKQLEKIKSMIPFDQMT------------PDDLNE--IF 140

  Fly   179 PHTPEEQMPGP 189
            |.|..::...|
  Rat   141 PETKLDKKKYP 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
knonNP_611133.1 Mt_ATP-synt_D 19..180 CDD:461764 33/130 (25%)
PTZ00121 <325..>704 CDD:173412
Atp5pdl1XP_017450045.2 Mt_ATP-synt_D 5..151 CDD:461764 35/139 (25%)
Blue background indicates that the domain is not in the aligned region.

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