DRSC/TRiP Functional Genomics Resources

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Protein Alignment knon and Atp5pd

DIOPT Version :10

Sequence 1:NP_611133.1 Gene:knon / 36845 FlyBaseID:FBgn0285943 Length:734 Species:Drosophila melanogaster
Sequence 2:NP_062256.1 Gene:Atp5pd / 641434 RGDID:620083 Length:161 Species:Rattus norvegicus


Alignment Length:168 Identity:45/168 - (26%)
Similarity:79/168 - (47%) Gaps:10/168 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KNVSCQVVELADLMKQVPPNQMHKFKMFAKKHEEYKDRVRKYPESMPTIDWEYYRQNVREEFVDW 83
            :.::.:.::....::.:|.||..........:|.:..|:....|..|.|||.|||.||.:..:  
  Rat     4 RKLALKTIDWVSFVEIMPQNQKAIGNALKSWNETFHTRLASLSEKPPAIDWAYYRANVDKPGL-- 66

  Fly    84 VKGYETKYDKLHSVFENRHAIVDHKRYFELVDEEKKVVTKCISEYKAESDKRIQELTEKLEFVKA 148
            |..::.||:.|       ...|...:|..|||.|:|...|..:::...|..|::|..::||.:|.
  Rat    67 VDDFKNKYNAL-------KIPVPEDKYTALVDAEEKEDVKNCAQFVTGSQARVREYEKQLEKIKN 124

  Fly   149 MRPYSEMTMEEFCFARPHLAPDFINKPTFWPHTPEEQM 186
            |.|:.:||:::.....|....|....| :|||.|.|.:
  Rat   125 MIPFDQMTIDDLNEVFPETKLDKRKYP-YWPHQPIENL 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
knonNP_611133.1 Mt_ATP-synt_D 19..180 CDD:461764 41/160 (26%)
PTZ00121 <325..>704 CDD:173412
Atp5pdNP_062256.1 Mt_ATP-synt_D 3..155 CDD:461764 41/160 (26%)
Blue background indicates that the domain is not in the aligned region.

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