DRSC/TRiP Functional Genomics Resources

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Protein Alignment knon and atp5pd

DIOPT Version :10

Sequence 1:NP_611133.1 Gene:knon / 36845 FlyBaseID:FBgn0285943 Length:734 Species:Drosophila melanogaster
Sequence 2:NP_956996.1 Gene:atp5pd / 393675 ZFINID:ZDB-GENE-040426-1658 Length:161 Species:Danio rerio


Alignment Length:164 Identity:42/164 - (25%)
Similarity:74/164 - (45%) Gaps:10/164 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KNVSCQVVELADLMKQVPPNQMHKFKMFAKKHEEYKDRVRKYPESMPTIDWEYYRQNVREEFVDW 83
            :..:.:.::.....::|||||...|.....:.:....::...||...||:|.:||..|.:  ...
Zfish     4 RRAAVKAIDWLAFAERVPPNQRAMFNSLKTRSDAISAKLASLPEKPSTINWSHYRAVVAK--AGM 66

  Fly    84 VKGYETKYDKLHSVFENRHAIVDHKRYFELVDEEKKVVTKCISEYKAESDKRIQELTEKLEFVKA 148
            |..:|.|:..| :|.|.    ||.:.  ..:|.:::...|..:.|...|..||.|..::||..:.
Zfish    67 VDEFEKKFAGL-TVPEP----VDTQT--AKIDAQEQEANKSAAAYLEASKARIAEYEKELEKFRN 124

  Fly   149 MRPYSEMTMEEFCFARPHLAPDFINKPTFWPHTP 182
            |.|:.:||:|:.....|....|....| :||:.|
Zfish   125 MIPFDQMTIEDLNNTFPETKLDKQKYP-YWPYKP 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
knonNP_611133.1 Mt_ATP-synt_D 19..180 CDD:461764 40/160 (25%)
PTZ00121 <325..>704 CDD:173412
atp5pdNP_956996.1 Mt_ATP-synt_D 3..154 CDD:461764 39/159 (25%)
Blue background indicates that the domain is not in the aligned region.

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