DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment knon and atp-5

DIOPT Version :10

Sequence 1:NP_611133.1 Gene:knon / 36845 FlyBaseID:FBgn0285943 Length:734 Species:Drosophila melanogaster
Sequence 2:NP_505829.1 Gene:atp-5 / 179541 WormBaseID:WBGene00007385 Length:191 Species:Caenorhabditis elegans


Alignment Length:143 Identity:27/143 - (18%)
Similarity:44/143 - (30%) Gaps:52/143 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NGGVKNVSCQVVELADLMKQVPPNQMHKFKMFAKKHEEYKDRVRKYPESMPTIDW---------- 69
            :|..|.|:...|..:.|.:::.|....:..........::..|.:.|..:|.||:          
 Worm     2 SGAAKRVATSSVNWSKLAERLVPEHAAELTRVKGVSGTFQSAVSQLPADLPKIDFAALKKALPAH 66

  Fly    70 -----------------------EYYRQNVREEFVD-WVKGYETKYDKLHSVFENRHAIVDHKRY 110
                                   ||.::      || || .|.....|||.|           :.
 Worm    67 SAVLDSLQKQYESVKIPYGEVPAEYLKE------VDQWV-DYNNARIKLHEV-----------KV 113

  Fly   111 FELVDEEKKVVTK 123
            .:.:.|.|||..|
 Worm   114 ADGLQEAKKVEEK 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
knonNP_611133.1 Mt_ATP-synt_D 19..180 CDD:461764 26/139 (19%)
PTZ00121 <325..>704 CDD:173412
atp-5NP_505829.1 Mt_ATP-synt_D 5..158 CDD:461764 26/140 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.