DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S-Lap8 and lap3

DIOPT Version :9

Sequence 1:NP_611132.1 Gene:S-Lap8 / 36844 FlyBaseID:FBgn0034132 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001011124.1 Gene:lap3 / 496537 XenbaseID:XB-GENE-1006711 Length:520 Species:Xenopus tropicalis


Alignment Length:489 Identity:201/489 - (41%)
Similarity:302/489 - (61%) Gaps:12/489 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QGVVVGLYAKD-GDKGLKLSPGGEKFDDRVGGKITELIKESGLNGELGVGRLYQNIDKEYWAVAV 113
            :|:|:|:|.|: .::.|.|:..|:..|:.|.||:.:.:..||.:.:.|..|::..:.:::.::.|
 Frog    32 KGLVLGVYEKEKEEESLTLTNAGDAVDNAVLGKLRDQLARSGPSLKKGKSRIFYGLHEDFPSIVV 96

  Fly   114 VGLGKEGAGFNAEEVIDEGMENVRVCAAVGARALQLQGCTTCHVDGMEYPEQAAEGAAMAVWRYN 178
            |||||:.||.|..|:.:|..||:|...:||.|.:|........||.....:.|||||.:.::.||
 Frog    97 VGLGKKSAGVNQHELWNEAKENIRAAVSVGCRQMQDMEIVQVEVDPCGDAQAAAEGAVLGLFEYN 161

  Fly   179 VNKRKKNRIAIPKLELYGSTDQDAWTRGLFKAESQNLARRLSDTPANQMTPSIFAQATVDALCPC 243
            ..|:||.:..  ...|:||::..||.:|:..||.|||||.|.:.|||.:||:.||:.....|...
 Frog   162 EMKKKKKKAV--TTHLHGSSEITAWEKGVLYAEGQNLARHLMEAPANYITPTKFAETFEQRLANM 224

  Fly   244 GVSVEV--RSMDWIETQNLNSFLMVAKGSCEPPIILEVSYCGTS-PEERPILMLGKGLTFNSGGL 305
            |.:|:|  ||..|||.|.:.:||.|||||.|||:.||:.|.|:| ..:.|::.:|||:||:|||:
 Frog   225 GSNVKVFTRSKQWIEEQQMGAFLSVAKGSEEPPVFLEIHYSGSSDASQPPLVFVGKGVTFDSGGI 289

  Fly   306 CLHPKRGMDEYRGAVSGAAVCVAAIRAAAALSLPINVSAVLPLCENMPSGMATKPGDVVTLLNGK 370
            .|.|..|||..||.:.|||...:||..||.|.||||:.::.|||||||:|.|.||||||...|||
 Frog   290 SLKPSSGMDAMRGDMGGAATVCSAITTAAKLKLPINIISLAPLCENMPNGRANKPGDVVKAKNGK 354

  Fly   371 TMRIKDISLAGTVLLADPLLYAQSTFKPKLVVEVGSMASGIRKGLGASATGLWTNNSFLWKNFQK 435
            |:::.:....|.:||||.|.||.| |.|:.:|...::...:...||::|.|::||:|:||.:.|:
 Frog   355 TIQVDNTDAEGRLLLADALCYAHS-FNPRAIVNAATLTGAMDVALGSAAAGVFTNSSWLWTHLQE 418

  Fly   436 AGALTGDRLWRMPLWRYFRKLVAPRASYDICSTGEGHAS--SCLAAAILYELVPCSDWVHLDTHG 498
            |..:||||:|||||:.::.|.|...|..|:.:.|:...|  :|.|||.|.|.|....|.|||.  
 Frog   419 ASVVTGDRVWRMPLFEHYSKQVTESALADLNNIGKYSRSGGACTAAAFLKEFVTAPHWAHLDI-- 481

  Fly   499 TGMLAKHGVPPYLLKDCMTGRPTRSIIQFLYQMA 532
            .|:::.....|||.|. |:|||||::|:|..:::
 Frog   482 AGVMSNKDEVPYLRKG-MSGRPTRTLIEFAARLS 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S-Lap8NP_611132.1 Peptidase_M17 51..528 CDD:238247 200/482 (41%)
PepB 66..532 CDD:223338 195/470 (41%)
lap3NP_001011124.1 Peptidase_M17 32..510 CDD:238247 200/483 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I7325
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D399611at33208
OrthoFinder 1 1.000 - - FOG0001058
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11963
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1683
SonicParanoid 1 1.000 - - X713
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.050

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