back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Parp16 and Parp8

DIOPT Version :9

Sequence 1:	NP_725583.1	Gene:	Parp16 / 36841	FlyBaseID:	FBgn0034129	Length:	359	Species:	Drosophila melanogaster
Sequence 2:	XP_006517781.1	Gene:	Parp8 / 52552	MGIID:	1098713	Length:	931	Species:	Mus musculus

Alignment Length:	259	Identity:	51/259 - (19%)
Similarity:	87/259 - (33%)	Gaps:	86/259 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    84 PFPSHWNTID---LVFN--------------------TLGDAPRLEVLQQQLMHCDYQACSPNVV 125
            |:||..:..|   |.||                    .:..||.||:.:|.    |.|  .|...
Mouse   657 PYPSVVDPNDPQMLAFNPRKKNYDRVMKALDSITSIREMTQAPYLEIKKQM----DKQ--DPLAH 715

  Fly   126 RLLTDIL-VDQADRVSLSSLRPCEFQELYAHLGMSPPKQ------PPTQIFEVRTGKGNEKGEAY 183
            .||..:: .:::..|.|...|..:|        |..|.|      ||.:....|..| ...|..:
Mouse   716 PLLQWVISSNRSHIVKLPVNRQLKF--------MHTPHQFLLLSSPPAKESNFRAAK-KLFGSTF 771

  Fly   184 ASLRQENKESVRLGFYGCKLEKVYALLNSQNSLDNGKYLELTCDINEALARSKPQAGVGGSRCGS 248
            |             |:|..:|..:::|.                 |..:..|..:..:.|:..||
Mouse   772 A-------------FHGSHIENWHSILR-----------------NGLVVASNTRLQLHGAMYGS 806

  Fly   249 --ILRCVAVVEFVF-----QDNETSRDKKQVIIKDANTMQVSYLLLYGQSCNEYAMERQIKLMA 305
              .|..::.:.|.:     :...:|:|:.....|.:|..|..   ..||. :::...|.:|.:|
Mouse   807 GIYLSPMSSISFGYSGMNKKQKVSSKDEPASSSKSSNASQSQ---KKGQQ-SQFLQSRNLKCIA 866

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.