DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Parp16 and parp16

DIOPT Version :9

Sequence 1:NP_725583.1 Gene:Parp16 / 36841 FlyBaseID:FBgn0034129 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_998071.1 Gene:parp16 / 405842 ZFINID:ZDB-GENE-040426-2289 Length:328 Species:Danio rerio


Alignment Length:362 Identity:84/362 - (23%)
Similarity:147/362 - (40%) Gaps:97/362 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LKPVTPHLRDLHLVQRRLQDDFLGCEALWTIFMAAAWSYRYRTRLRPFPSHWNTIDLVFNTLGDA 102
            ::|..|......||...|..|.:..:...::|:||..||::.:.|||||..:        ..|:.
Zfish     1 MQPPLPAAAVRELVCSCLHRDPVAADLRCSLFVAAVQSYKHDSVLRPFPPRY--------LRGEI 57

  Fly   103 PRLEVLQQQLMHCDYQACSPNV--------------VRLLTDILVDQADRVSLSSLRPCEF---Q 150
            ...|.||:.:      ...|||              :.|:..:|..::  .::.:|:..||   .
Zfish    58 KDFEELQKDV------DSLPNVRDLVRLGHGDGDHHMALVHWVLSSKS--FAVKTLQKEEFARLS 114

  Fly   151 ELYAHLGMSPPKQPPTQIFEVRTGKGNEKGEAYASLRQENKESVRLG------FYGCKLEKVYAL 209
            :|....|:|.|  .|..:||::          |..|.....|..|.|      |:|.:||..:::
Zfish   115 QLAQREGVSAP--APDFLFELQ----------YCDLLNSKFERTRAGRDLIYAFHGSRLENFHSI 167

  Fly   210 --------LNSQNSLDNGKYLELTCDINEALARSKPQAGVGGSRCGSILRCVAVVEFV------- 259
                    ||..:....|.|  ||.|::.|:..|....|...|..|..:.|||:.|.:       
Zfish   168 IHNGLHCHLNKTSLFGEGTY--LTSDLSMAILYSPHGNGWRESVLGPFISCVALCEIIDHPDVKC 230

  Fly   260 ---FQDNET-------SRD-------KKQVIIKDANTMQVSYLLLYGQSCNEYAMERQIKLMAEP 307
               .:|:|:       :|:       :|..::.:...::|.|||:|.|.          :..:..
Zfish   231 QVKKKDSESIDRQRLRARNSEGGEVPEKYFVVTNNELLRVKYLLVYSQR----------RYRSRH 285

  Fly   308 ARELLNWLERYHKKAISLGVGLLIVSSMAHFGSTFFR 344
            ||. .:||.|:| .||.:|:.||::..:..|.|:.|:
Zfish   286 ARG-TSWLVRHH-FAIMMGLYLLLLIFIGAFNSSAFQ 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Parp16NP_725583.1 ARTD15_N 53..132 CDD:375539 20/92 (22%)
parp16NP_998071.1 PARP 106..278 CDD:279038 43/185 (23%)
ADP_ribosyl 155..>216 CDD:294202 16/62 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CM85
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 47 1.000 Inparanoid score I5473
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1618442at2759
OrthoFinder 1 1.000 - - FOG0008351
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107575
Panther 1 1.100 - - LDO PTHR21328
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4886
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.900

Return to query results.
Submit another query.