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Protein Alignment Parp16 and Parp8

DIOPT Version :9

Sequence 1:	NP_725583.1	Gene:	Parp16 / 36841	FlyBaseID:	FBgn0034129	Length:	359	Species:	Drosophila melanogaster
Sequence 2:	XP_038959446.1	Gene:	Parp8 / 294762	RGDID:	1587384	Length:	894	Species:	Rattus norvegicus

Alignment Length:	260	Identity:	53/260 - (20%)
Similarity:	88/260 - (33%)	Gaps:	88/260 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    84 PFPSHWNTID---LVFN--------------------TLGDAPRLEVLQQQLMHCDYQACSPNVV 125
            |:||..:..|   |.||                    .:..||.||:.:|.    |.|  .|...
  Rat   620 PYPSVVDPNDPQMLAFNPRKKNYDRVMKALDSITSIREMTQAPYLEIKKQM----DKQ--DPLAH 678

  Fly   126 RLLTDIL-VDQADRVSLSSLRPCEFQELYAHLGMSPPKQ------PPTQIFEVRTGKGNEKGEAY 183
            .||..:: .:::..|.|...|..:|        |..|.|      ||.:....|..| ...|..:
  Rat   679 PLLQWVISSNRSHIVKLPVNRQLKF--------MHTPHQFLLLSSPPAKESNFRAAK-KLFGSTF 734

  Fly   184 ASLRQENKESVRLGFYGCKLEKVYALLNSQNSLDNGKYLELTCDINEALARSKPQAGVGGSRCGS 248
            |             |:|..:|..:::|.                 |..:..|..:..:.|:..||
  Rat   735 A-------------FHGSHIENWHSILR-----------------NGLVVASNTRLQLHGAMYGS 769

  Fly   249 --ILRCVAVVEFVFQDNETSRDKKQ-VIIKD-----ANTMQVSYLLLYGQSCNEYAMERQIKLMA 305
              .|..::.:.|.:    :..:||| |..||     :.:...|.....||. :::...|.:|.:|
  Rat   770 GIYLSPMSSISFGY----SGMNKKQKVSTKDEPASSSKSSNASQSQKKGQQ-SQFLQSRNLKCIA 829

Fly 306 305
Rat 830 829

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.