DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4409 and CG3906

DIOPT Version :10

Sequence 1:NP_001097337.1 Gene:CG4409 / 36840 FlyBaseID:FBgn0034128 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_611802.1 Gene:CG3906 / 37721 FlyBaseID:FBgn0034871 Length:240 Species:Drosophila melanogaster


Alignment Length:210 Identity:41/210 - (19%)
Similarity:83/210 - (39%) Gaps:29/210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SEESDE--SDQGNASDDLIFLSRQKPSPVNNSVDLSA----FVALIPLQEVQSIAAHYYHHDAEF 108
            ||||:|  ..:.|.:|:      ..|:..::...|.|    ..|:|..:.:.::...:|:.|.:|
  Fly    30 SEESEEWCPPENNNTDN------NNPNRTDHDSALCANFQHIRAMINQEALLNLIEVHYNCDLKF 88

  Fly   109 QRSYAFLASSDFADIKRKILQLPEVLEFTNYLGNNGLDVVKVMHSVAGVFKPSILSSAAVNEPTK 173
            :|:..:..::.|....:::............|.:..:|...: .:||.:|...||   .|.:|.:
  Fly    89 RRAMRYYNTAGFERTTQQLTDTDAYKTVLKELQSESVDTADI-ETVADIFHCIIL---PVRQPDR 149

  Fly   174 VTTTEDGSSAAGEAQTGLHGMVERVLEILPQDQLYALFFDEFESNKQFAAFVDSISSPKFAKILS 238
            ....:         ....|..|..:|.|:|:.:::........::..|..|..::.|.:|...|.
  Fly   150 NCDCK---------AVKHHTFVGDLLSIMPKQEVHNYVAQSQANHTNFGNFTKAVVSKQFQATLK 205

  Fly   239 GLQNS----MPLRNL 249
            ...|.    .|||.|
  Fly   206 ANINKRDVVKPLRTL 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4409NP_001097337.1 Ins_allergen_rp 81..264 CDD:462003 33/177 (19%)
CG3906NP_611802.1 Ins_allergen_rp 58..231 CDD:462003 33/176 (19%)

Return to query results.
Submit another query.