DRSC/TRiP Functional Genomics Resources

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Protein Alignment ITGAM and LOC101735096

DIOPT Version :10

Sequence 1:NP_001139280.1 Gene:ITGAM / 3684 HGNCID:6149 Length:1153 Species:Homo sapiens
Sequence 2:XP_031749690.1 Gene:LOC101735096 / 101735096 XenbaseID:XB-GENE-29088291 Length:1157 Species:Xenopus tropicalis


Alignment Length:1165 Identity:488/1165 - (41%)
Similarity:704/1165 - (60%) Gaps:43/1165 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MALRVLLLTALTLCHGFNLDTENAMTFQENARGFGQSVVQLQGSRVVVGAPQEIVAANQRGSLYQ 65
            ::..:..:..|:...||.:||...:.||.....||..|||| |.||:|.||.:....|:.|:||.
 Frog     8 LSRNIWFIAVLSSADGFFVDTAQPIIFQNPDGSFGYQVVQL-GQRVIVSAPLQRDGVNKTGALYS 71

Human    66 CDYSTGSCEPIRLQVPVEAVNMSLGLSLAA-TTSPPQLLACGPTVHQTCSENTYVKGLCFLFGSN 129
            ||.||.||:.:.:....|.:.:||||::.. ..:|.||||||||:.:||.::.||.|.|:...|:
 Frog    72 CDPSTSSCQRVPINGSPEDIKISLGLTMVTQERNPSQLLACGPTLQRTCGQSIYVMGRCYQLDSS 136

Human   130 LRQQPQKFPEALRGCPQEDSDIAFLIDGSGSIIPHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSE 194
            ||.| |..|.:|..||....||||||||||||.|..|:.|..|||.|:|..:.:.|||::||||.
 Frog   137 LRHQ-QTLPPSLPECPVRSLDIAFLIDGSGSIDPDQFQEMLTFVSKVIEDFEGTDTLFAIMQYSN 200

Human   195 EFRIHFTFKEFQNNPNPRSLVKPITQLLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDG 259
            .|..||.||:|....:.|.|:..||||.|.|.|||||:||:||||..::|:|..:.|.|:|||||
 Frog   201 LFTEHFNFKKFSAARDKRRLIWSITQLRGTTWTATGIQKVLRELFIPSSGSRHGSQKFLIVITDG 265

Human   260 EKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEALKTI 324
            ||:||.|.|...|.||:..||:|:.||||.|||:.|:..|||||||||...:|::|::|.||...
 Frog   266 EKYGDTLDYSGPIAEAEGMGVVRFAIGVGGAFRNSKALNELNTIASKPSDKYVYKVSDFSALSKF 330

Human   325 QNQLREKIFAIEGTQTGSSSSFEHEMSQEGFSAAITSNGPLLSTVGSYDWAGGVFLYTSKE-KST 388
            :..|::|||||||.|..:.|.|:.||||:|||:.::::..:|..||:|||:||..:|...: |..
 Frog   331 RKDLQDKIFAIEGVQVNTGSGFQMEMSQDGFSSVLSADHIVLGAVGAYDWSGGASVYAKGQMKGV 395

Human   389 FINMTRVDSDMNDAYLGYAAAIILRNRVQSLVLGAPRYQHIGLVAMFRQN--TGMWESNANVKGT 451
            :||.|:...||..||:|||   :.:...:.:.:|||||||.|.|.:::::  :..|...|.::|.
 Frog   396 WINETQDQKDMKAAYMGYA---VHQLSAKLIAIGAPRYQHTGSVLIYQKDLYSSNWNQRAVIRGE 457

Human   452 QIGAYFGASLCSVDVDSNGSTDLVLIGAPHYY-EQTRGGQVSVCPLPRGQRARWQCDAVLYGEQG 515
            :||:|||:.|....|:|..|..|:|:|||.|| ..|..|:|.:||:.........|...|.|:..
 Frog   458 KIGSYFGSVLNGGSVNSGSSQVLLLVGAPTYYTPDTPEGRVFLCPIHTRTSVTVSCPIALQGDPT 522

Human   516 QPWGRFGAALTVLGDVNGDKLTDVAIGAPGEEDNRGAVYLFHGTSGSGISPSHSQRIAGSKLSPR 580
            |.:|.||:|:.:|.|:.||.|.|:|:|||.|..|:||:|:|.|..| |...::.||||.|:::..
 Frog   523 QYFGHFGSAMCLLPDLTGDNLIDLAVGAPCENQNQGAIYIFPGQKG-GFRTAYIQRIASSQVAKG 586

Human   581 LQYFGQSLSGGQDLTMDGLVDLTVGAQGHVLLLRSQPVLRVKAIMEFNPREVARNVFECNDQVVK 645
            |.:||:|:||..|:|.|.|.||:||..|.||:|||:.|:.|...|.|||.|:..:.:||.|....
 Frog   587 LMFFGRSMSGNLDMTRDSLPDLSVGGAGKVLILRSRTVVGVSVSMTFNPAEIPISSYECPDADTT 651

Human   646 GKEAGEVRVCLHVQKSTRDRLREGQIQSVVTYDLALDSGRPHSRAVFNETKNSTRRQTQVLGLTQ 710
             |.|..:.||:...:.:    ..|::.:.:||.|.||:||...|||| ..|..:.:||..|...:
 Frog   652 -KAATTIVVCVTCTRKS----PAGEVSAQMTYTLLLDAGRVQKRAVF-PGKEHSLQQTFPLRQGR 710

Human   711 TCETLKLQLPNCIEDPVSPIVLRLNFSLVGTPLSAFGNLRPVLAEDAQRLFTALFPFEKNCGNDN 775
            .|....:.||.|:||.:||:.:.|:|:|.|         :.||::|:....:....|:||||:|.
 Frog   711 NCIPYPITLPECVEDSLSPLSVALSFTLTG---------QSVLSQDSPTSLSEQVSFQKNCGSDG 766

Human   776 ICQDDLSITFSFMSLDCLVVGGPREFNVTVTVRNDGEDSYRTQVTFFFPLDLSYRKVSTLQNQRS 840
            .|||||.|..:|..|..||||...|.||.::|:|.|||||.::|...||..||||.||.:|:.| 
 Frog   767 RCQDDLRINATFGDLRHLVVGVSLEVNVILSVQNHGEDSYNSRVIITFPSGLSYRMVSLIQSNR- 830

Human   841 QRSWRLACESASSTEVSGALKSTSCSINHPIFPENSEVTFNITFDVDSKASLGNKLLLKANVTSE 905
                ||.....|:.|   ..:...|.||:|:...|:..||.::|.|.|.|.||.:|.:..||||:
 Frog   831 ----RLMTIKCSTPE---GERYVICGINNPLLRPNATATFLVSFHVSSLADLGKRLTITTNVTSD 888

Human   906 NNMPRTNKTEFQLELPVKYAVYMVVTSHGVSTKYLNFTASENTS--RVMQHQYQVSNLGQRSLPI 968
            |.....|..:...||.|.|.:|:.:||...||||.||:.|..:.  |.::|.|:|.|.|||||||
 Frog   889 NGGAPNNLMKSTAELKVLYGIYVTITSLEESTKYTNFSLSGRSPIVREVKHMYKVGNQGQRSLPI 953

Human   969 SLVFLVPVRLNQTVIWDRPQVTFSE----NLSSTCHTKERLPSHSDFLAELRKAPVVNCSIAVCQ 1029
            |::|:|||:|.:||:|::|.:|.||    |.:::|.....:.:..:|..:....||:||::..|.
 Frog   954 SIIFMVPVKLKETVVWEKPVITISEEGLSNSTTSCTNTGEITNTQEFQQQNEVRPVLNCTVMTCL 1018

Human  1030 RIQCDIPFFGIQEEFNATLKGNLSFDWYIKTSHNHLLIVSTAEILFNDSVFT-LLPGQGAFVRSQ 1093
            |..|.|....|.:..|.|:.|.::.||..:|:|..:|:.|:|||:::...:. :|.....|.|:|
 Frog  1019 RFVCSINSLDIHKSINFTITGQVTKDWATQTAHQKVLLQSSAEIMYDSERYQHILEQNQPFTRAQ 1083

Human  1094 TETKVEPFEVPNPLPLIVGSSVGGLLLLALITAALYKLGFFKRQYKDMMS--EGGPPGAE 1151
            .:|.:|.|...|.||:|:|||||||:|||||||.|||:||||||||::|.  ||...|.|
 Frog  1084 AQTVLEVFTEYNYLPVIIGSSVGGLVLLALITAGLYKVGFFKRQYKELMELPEGETVGGE 1143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ITGAMNP_001139280.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 18..75 26/56 (46%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 76..135 24/59 (41%)
vWA_integrins_alpha_subunit 149..324 CDD:238746 95/174 (55%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 339..390 20/51 (39%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 391..442 18/52 (35%)
Int_alpha 453..>495 CDD:214549 19/42 (45%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 507..565 26/57 (46%)
Int_alpha 517..563 CDD:214549 22/45 (49%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 570..630 30/59 (51%)
Integrin_alpha2 616..979 CDD:462478 139/364 (38%)
Integrin_alpha 1130..1144 CDD:459778 10/15 (67%)
GFFKR motif 1132..1136 3/3 (100%)
LOC101735096XP_031749690.1 vWFA 155..327 CDD:469594 93/171 (54%)
Int_alpha 459..515 CDD:214549 22/55 (40%)
Int_alpha 525..578 CDD:214549 24/53 (45%)
Integrin_alpha2 622..1022 CDD:462478 156/422 (37%)
Integrin_alpha 1120..1133 CDD:459778 9/12 (75%)

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