DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7848 and NADP-ME3

DIOPT Version :9

Sequence 1:NP_611127.1 Gene:CG7848 / 36839 FlyBaseID:FBgn0034127 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_197960.1 Gene:NADP-ME3 / 832657 AraportID:AT5G25880 Length:588 Species:Arabidopsis thaliana


Alignment Length:544 Identity:192/544 - (35%)
Similarity:301/544 - (55%) Gaps:8/544 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 SKVDGLWMLNQSNYNKGLAFTLNERRVLSIHGLLPVAVRTIDEQAEICSNLLESFTNNVQQYIYL 132
            |...|..::....||||||||..||....|.||||..|.:.|.|.....:.|..:|..:|:|:.|
plant    45 SVASGYTLMRDPRYNKGLAFTDKERDAHYITGLLPPVVLSQDVQERKVMHNLRQYTVPLQRYMAL 109

  Fly   133 TYLSRRNRRLFYYLLLSNPDRFVPMTDASGSIDLLMVHRMIHSMGQGLYICIKDLGHVSQILSNW 197
            ..|..||.||||.||:.|.:..:|:.......:....:..|:...|||||.:|:.|.:.::|.||
plant   110 MDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKEKGKILEVLKNW 174

  Fly   198 PFRCVRCLLVSNGASVLSVGDLGVDEMPILFSNLHQNVVYGGIHPAYCLAVMLDVGTNNEELLND 262
            |.|.::.::|::|..:|.:||||...|.|....|......|||.|:.||.:.:|||||||:|||:
plant   175 PQRGIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEKLLNN 239

  Fly   263 PMYTGLRERRCSEKLYDQLFEEFTLSVMQQYGPRALILCKDFEAQKAKKQLELYRERQCIVDVDF 327
            ..|.||:::|.:.:.|.:..:||..:|.|.||.:.|:..:||....|.:.|..|.....:.:.|.
plant   240 EFYIGLKQKRANGEEYAEFLQEFMCAVKQNYGEKVLVQFEDFANHHAFELLSKYCSSHLVFNDDI 304

  Fly   328 QCFAAVALAGVIVCNRLKRVFFSSNVFLFYGAEAINIGMARLCMVLLKRE-GLIEMKAREKIWFF 391
            |..|:|.|||:|...::.....:.:.|||.||.....|:|.|..:.:.:| |....:.|:|||..
plant   305 QGTASVVLAGLIAAQKVLGKSLADHTFLFLGAGEAGTGIAELIALKISKETGKPIDETRKKIWLV 369

  Fly   392 DANGLVVLGRKDIPEELLEF----ANQRDPILDLVEAIQELKPNILVGGSSLPNTFTPDVLRAME 452
            |:.||:|..||   |.|..|    |:...|:.:|:.|:..:||.:|:|.|.:..|||.:|:.||.
plant   370 DSKGLIVSERK---ESLQHFKQPWAHDHKPVKELLAAVNAIKPTVLIGTSGVGKTFTKEVVEAMA 431

  Fly   453 KSADQPVIFALSRPLEQTECSAEDAFSYTKGHCIFISGSKLPPLKYANKWYQPGHCTSSYLVAGI 517
            ...::|:|.|||.|..|.||:||:|:::|||..||.|||...|::|..|.:.||...:.|:..|:
plant   432 TLNEKPLILALSNPTSQAECTAEEAYTWTKGRAIFASGSPFDPVQYDGKKFTPGQANNCYIFPGL 496

  Fly   518 SCGVMLAGFTNIPDEAFCVAAERLASLVWPCDLEKRNVYPPMRKIQCISLQIAEAIFSYAFGRGL 582
            ..|::::|...:.|:....|:|.|||.|...:.....:|||...|:.||..||.::.:..:..||
plant   497 GLGLIMSGAIRVRDDMLLAASEALASQVTEENFANGLIYPPFANIRKISANIAASVGAKTYELGL 561

  Fly   583 ATLYPQPENPMEYIKNSMYNPEYR 606
            |:..|:|::.::..::.||:|.||
plant   562 ASNLPRPKDLVKMAESCMYSPVYR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7848NP_611127.1 PLN03129 81..606 CDD:215594 188/529 (36%)
malic 138..317 CDD:278802 65/178 (37%)
NAD_bind_1_malic_enz 327..603 CDD:133454 96/280 (34%)
NADP-ME3NP_197960.1 PLN03129 20..588 CDD:215594 192/544 (35%)
malic 113..293 CDD:278802 65/179 (36%)
NAD_bind_1_malic_enz 304..582 CDD:133454 96/280 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 50 1.000 Domainoid score I4360
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D435571at2759
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.880

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