DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7848 and NAD-ME1

DIOPT Version :9

Sequence 1:NP_611127.1 Gene:CG7848 / 36839 FlyBaseID:FBgn0034127 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_178980.1 Gene:NAD-ME1 / 815842 AraportID:AT2G13560 Length:623 Species:Arabidopsis thaliana


Alignment Length:578 Identity:185/578 - (32%)
Similarity:304/578 - (52%) Gaps:52/578 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GLWMLNQSNYNKGLAFTLNERRVLSIHGLLPVAVRTIDEQAEICSNLLE------------SFTN 124
            ||.:|:...:|||.|||:.||..|.:.||||..|  :|.:.:|...:.:            |..|
plant    46 GLDILHDPWFNKGTAFTMTERNRLDLRGLLPPNV--MDSEQQIFRFMTDLKRLEEQARDGPSDPN 108

  Fly   125 NVQQYIYLTYLSRRNRRLFYYLLLSNPDRFVPM--TDASGSIDLLMVHRMIHSMGQGLYICIKDL 187
            .:.::..|..|..||..::|.:|::|.:.:.|:  |...|.:  ...:..:....:|:|...:|.
plant   109 ALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVGLV--CQNYSGLFRRPRGMYFSAEDR 171

  Fly   188 GHVSQILSNWPFRCVRCLLVSNGASVLSVGDLGVDEMPILFSNLHQNVVYGGIHPAYCLAVMLDV 252
            |.:..::.|||...|..::|::|:.:|.:|||||..:.|....|...|...||:|...|.||:||
plant   172 GEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGIGIAVGKLDLYVAAAGINPQRVLPVMIDV 236

  Fly   253 GTNNEELLNDPMYTGLRERRCSEKLYDQLFEEFTLSVMQQYGPRALILCKDFEAQKAKKQLELYR 317
            |||||:|.|||||.||::||..:..|..:.:||..:|..:: |..::..:||:::.|.|.|:.||
plant   237 GTNNEKLRNDPMYLGLQQRRLEDDDYIDVIDEFMEAVYTRW-PHVIVQFEDFQSKWAFKLLQRYR 300

  Fly   318 ERQCIVDVDFQCFAAVALAGVIVCNRLK---RVFFSSNVFLFYGAEAINIGM---ARLCM--VLL 374
            ....:.:.|.|..|.||:||::...|.:   .:.|.....:..||.:..||:   ||..|  :|.
plant   301 CTYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKMKIVVAGAGSAGIGVLNAARKTMARMLG 365

  Fly   375 KREGLIEMKAREKIWFFDANGLVVLGRKDIPEELLEFAN-----QRDPILD---LVEAIQELKPN 431
            ..|...: .|:.:.|..||.||:..||::|..|...||.     :|..:.:   |||.::|:||:
plant   366 NTETAFD-SAQSQFWVVDAQGLITEGRENIDPEAQPFARKTKEMERQGLKEGATLVEVVREVKPD 429

  Fly   432 ILVGGSSLPNTFTPDVLRAMEKS-ADQPVIFALSRPLEQTECSAEDAFSYTKGHCIFISGSKLPP 495
            :|:|.|::...|:.:||.||:.| :.:|.|||:|.|.:..||:.:||||....:.||.|||....
plant   430 VLLGLSAVGGLFSKEVLEAMKGSTSTRPAIFAMSNPTKNAECTPQDAFSILGENMIFASGSPFKN 494

  Fly   496 LKYANKWYQPGHC---TSSYLVAGISCGVMLAGFTNIPDEAFCVAAERLASLVWPCDLEKRNVYP 557
            :::.|.  ..|||   .:.||..||..|.:|:|...:.|.....|:|.||:.:...::.:..:||
plant   495 VEFGNG--HVGHCNQGNNMYLFPGIGLGTLLSGAPIVSDGMLQAASECLAAYMSEEEVLEGIIYP 557

  Fly   558 PMRKIQCISLQIAEAIFSYAFGRGLATLYPQ----------PENPMEYIKNSMYNPEY 605
            |:.:|:.|:.:||.|:...|....|...|.:          .|..|||::|:|:||||
plant   558 PISRIRDITKRIAAAVIKEAIEEDLVEGYREMDAREIQKLDEEGLMEYVENNMWNPEY 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7848NP_611127.1 PLN03129 81..606 CDD:215594 182/569 (32%)
malic 138..317 CDD:278802 60/180 (33%)
NAD_bind_1_malic_enz 327..603 CDD:133454 95/305 (31%)
NAD-ME1NP_178980.1 PLN03129 25..619 CDD:215594 185/578 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D435571at2759
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X340
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.780

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