DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7848 and me2

DIOPT Version :9

Sequence 1:NP_611127.1 Gene:CG7848 / 36839 FlyBaseID:FBgn0034127 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001003627.2 Gene:me2 / 445233 ZFINID:ZDB-GENE-040801-147 Length:581 Species:Danio rerio


Alignment Length:544 Identity:203/544 - (37%)
Similarity:308/544 - (56%) Gaps:8/544 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 MLNQSNYNKGLAFTLNERRVLSIHGLLPVAVRTIDEQAEICSNLLESFTNNVQQYIYLTYLSRRN 139
            |||... |||:||||.||::|.||||||..:.|.|.||......|:..::.:|:||||..:..||
Zfish    29 MLNPRT-NKGMAFTLKERQMLGIHGLLPSKIETQDTQAMRFQKNLKKMSDPLQKYIYLMGIQERN 92

  Fly   140 RRLFYYLLLSNPDRFVPM--TDASGSIDLLMVHRMIHSMGQGLYICIKDLGHVSQILSNWPFRCV 202
            .||||.:|:.:.:..:|:  |...|.......|  |....:||:|.|||.||:..||.|||...|
Zfish    93 ERLFYRVLMEDIEALMPIVYTPTVGLACTQYGH--IFRRPKGLFISIKDQGHIRSILDNWPDTSV 155

  Fly   203 RCLLVSNGASVLSVGDLGVDEMPILFSNLHQNVVYGGIHPAYCLAVMLDVGTNNEELLNDPMYTG 267
            :.::|::|..:|.:|||||..|.|....|.......||.|..||.|.:||||:||:||.||.|.|
Zfish   156 KAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPESCLPVCIDVGTDNEKLLRDPFYMG 220

  Fly   268 LRERRCSEKLYDQLFEEFTLSVMQQYGPRALILCKDFEAQKAKKQLELYRERQCIVDVDFQCFAA 332
            |.:||...:.||.|.:||..:|:.:||...||..:||....|.:.|:.|||:.|..:.|.|..|:
Zfish   221 LYQRRDRSQRYDDLIDEFMEAVVDKYGQDTLIQFEDFGNHNAFRFLKKYREKYCTFNDDIQGTAS 285

  Fly   333 VALAGVIVCNRLKRVFFSSNVFLFYGAEAINIGMARLCMVLLKREGLIEMKAREKIWFFDANGLV 397
            |||||::...|......:.:..||.||....:|:|.|.::.:...|:.:..||:|||.||..||:
Zfish   286 VALAGLLAAQRAVGKPLTEHKVLFLGAGEAALGIANLIVMAMMESGMSQADARKKIWMFDKYGLL 350

  Fly   398 VLGRKDIPEELLEFANQRDP--ILDLVEAIQELKPNILVGGSSLPNTFTPDVLRAMEKSADQPVI 460
            |..|....:...|.....||  :...::|:..:||..::|.|.....||.||::||....::|:|
Zfish   351 VKDRAYETDSNQEAFVHPDPGDVKSFLDAVNVIKPTAIIGVSGAGRLFTHDVIKAMGNLNERPII 415

  Fly   461 FALSRPLEQTECSAEDAFSYTKGHCIFISGSKLPPLKYAN-KWYQPGHCTSSYLVAGISCGVMLA 524
            ||||.|..:.||:||||:|.|:|.|:|.|||...|:...: :...||...::|:..|::..|:|:
Zfish   416 FALSNPTAKAECTAEDAYSLTQGRCLFASGSPFAPVSLEDGRILTPGQGNNAYIFPGVALAVILS 480

  Fly   525 GFTNIPDEAFCVAAERLASLVWPCDLEKRNVYPPMRKIQCISLQIAEAIFSYAFGRGLATLYPQP 589
            |..:|.|..|..||:.||..:...:|.:..:|||:..|:.:|||:|..:..|.:.:|:|..||:|
Zfish   481 GVRHISDTVFLEAAKTLADQLTDEELSQGRLYPPLSNIREVSLQMAIKVVEYVYSKGMAFRYPEP 545

  Fly   590 ENPMEYIKNSMYNPEYRMNIVDVY 613
            .:...|:::.::|..|...:.|:|
Zfish   546 VDKESYVRSVVWNTNYDSFLPDIY 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7848NP_611127.1 PLN03129 81..606 CDD:215594 197/529 (37%)
malic 138..317 CDD:278802 72/180 (40%)
NAD_bind_1_malic_enz 327..603 CDD:133454 93/278 (33%)
me2NP_001003627.2 PLN03129 18..565 CDD:215594 201/538 (37%)
malic 89..270 CDD:278802 72/182 (40%)
NAD_bind_1_malic_enz 280..559 CDD:133454 93/278 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595266
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D435571at2759
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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