DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7848 and Men-b

DIOPT Version :9

Sequence 1:NP_611127.1 Gene:CG7848 / 36839 FlyBaseID:FBgn0034127 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001163750.1 Gene:Men-b / 43936 FlyBaseID:FBgn0029155 Length:624 Species:Drosophila melanogaster


Alignment Length:548 Identity:202/548 - (36%)
Similarity:319/548 - (58%) Gaps:10/548 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 SKVDGLWMLNQSNYNKGLAFTLNERRVLSIHGLLPVAVRTIDEQAEICSNLLESFTNNVQQYIYL 132
            |:|.|:..:.....||||||||.||:.|.||||.|...:|.:||.::|...:..:|..:.:|:||
  Fly    49 SQVRGIDHIRDPRLNKGLAFTLEERQTLGIHGLQPARFKTQEEQLQLCKIAVNRYTEPLNKYLYL 113

  Fly   133 TYLSRRNRRLFYYLLLSNPDRFVPM--TDASGSIDLLMVHR--MIHSMGQGLYICIKDLGHVSQI 193
            :.|..||.|||:..|..|.:..:|:  |...|    |...|  :|:....||:|...|.||:..:
  Fly   114 SDLYDRNERLFFRFLSENIEDLMPIVYTPTVG----LACQRFGLIYRRPHGLFITYNDRGHIFDV 174

  Fly   194 LSNWPFRCVRCLLVSNGASVLSVGDLGVDEMPILFSNLHQNVVYGGIHPAYCLAVMLDVGTNNEE 258
            :.|||...||.:.|::|..:|.:||||...|.|....|.......||.|..||.:::||||||.:
  Fly   175 MKNWPEPNVRAICVTDGERILGLGDLGACGMGIPVGKLALYTALAGIKPHQCLPIVVDVGTNNID 239

  Fly   259 LLNDPMYTGLRERRCSEKLYDQLFEEFTLSVMQQYGPRALILCKDFEAQKAKKQLELYRERQCIV 323
            ||.||:|.|||::|...:.||:..:||..:|:|:||...||..:||....|.:.|:.||...|..
  Fly   240 LLEDPLYVGLRQKRVVGREYDEFIDEFMEAVVQRYGQNTLIQFEDFGNHNAFRFLDKYRNTYCTF 304

  Fly   324 DVDFQCFAAVALAGVIVCNRLKRVFFSSNVFLFYGAEAINIGMARLCMVLLKREGLIEMKAREKI 388
            :.|.|..|:||:||:....|:....|....|||.||....||:|.|.:..:.::|:...:|..:|
  Fly   305 NDDIQGTASVAVAGLYASKRITGKSFKDYTFLFAGAGEAAIGIADLTVKAMVQDGVPIEEAYNRI 369

  Fly   389 WFFDANGLVVLGRK--DIPEELLEFANQRDPILDLVEAIQELKPNILVGGSSLPNTFTPDVLRAM 451
            :..|.:||:...||  ::....:.:|...:|:.||.|.:..:||::|:|.|:....|||::||.|
  Fly   370 YMVDIDGLLTKSRKVGNLDGHKIHYAKDINPMSDLAEIVSTIKPSVLIGASAAAGIFTPEILRTM 434

  Fly   452 EKSADQPVIFALSRPLEQTECSAEDAFSYTKGHCIFISGSKLPPLKYANKWYQPGHCTSSYLVAG 516
            ..:.::||:||||.|..:.||:||||:.:|....||.|||..||::..:|.:.||...::|:..|
  Fly   435 ADNNERPVVFALSNPTSKAECTAEDAYKHTDARVIFSSGSPFPPVQIGDKTFYPGQGNNAYIFPG 499

  Fly   517 ISCGVMLAGFTNIPDEAFCVAAERLASLVWPCDLEKRNVYPPMRKIQCISLQIAEAIFSYAFGRG 581
            :..||:..|..:||||.|.:||:.||:.|.|.|:|:.::|||:..|:.:|:.||..:...|:.||
  Fly   500 VGLGVICTGTHHIPDEMFLIAAQELANFVEPSDIERGSLYPPLSSIRNVSMNIAVGVTKCAYDRG 564

  Fly   582 LATLYPQPENPMEYIKNSMYNPEYRMNI 609
            ||:.||:|::..::::|.:||..|..::
  Fly   565 LASTYPEPQDKRKWLENQLYNFNYESSM 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7848NP_611127.1 PLN03129 81..606 CDD:215594 198/530 (37%)
malic 138..317 CDD:278802 68/182 (37%)
NAD_bind_1_malic_enz 327..603 CDD:133454 100/277 (36%)
Men-bNP_001163750.1 PLN03129 51..590 CDD:215594 201/542 (37%)
malic 117..298 CDD:278802 68/184 (37%)
NAD_bind_1_malic_enz 308..585 CDD:133454 99/276 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469228
Domainoid 1 1.000 50 1.000 Domainoid score I4360
eggNOG 1 0.900 - - E1_COG0281
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I521
Isobase 1 0.950 - 0 Normalized mean entropy S996
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D435571at2759
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
109.850

Return to query results.
Submit another query.