DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7848 and Menl-1

DIOPT Version :9

Sequence 1:NP_611127.1 Gene:CG7848 / 36839 FlyBaseID:FBgn0034127 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001027428.1 Gene:Menl-1 / 3772542 FlyBaseID:FBgn0029154 Length:610 Species:Drosophila melanogaster


Alignment Length:535 Identity:178/535 - (33%)
Similarity:280/535 - (52%) Gaps:5/535 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 NKGLAFTLNERRVLSIHGLLPVAVRTIDEQAEICSNLLESFTNNVQQYIYLTYLSRRNRRLFYYL 146
            ||.|||||.||:.|.||||:|..|||.|||.....:...||.:||.:|.||..|.:...||::..
  Fly    56 NKALAFTLEERQRLCIHGLMPACVRTYDEQMLAIESNFHSFESNVGRYRYLRALRQGYERLYFQF 120

  Fly   147 LLSNPDRFVPM--TDASGSIDLLMVHRMIHSMGQGLYICIKDLGHVSQILSNWPF-RCVRCLLVS 208
            :..|....:|:  |...|.  ...|:.|::....|::|...|.||:.|||||||. |.|:.:.|:
  Fly   121 VSKNVHAVLPIIYTPTVGL--ACTVYGMLYRGMTGIHITKHDRGHMKQILSNWPMRRSVKAICVT 183

  Fly   209 NGASVLSVGDLGVDEMPILFSNLHQNVVYGGIHPAYCLAVMLDVGTNNEELLNDPMYTGLRERRC 273
            :|..:|.:||||.:.|.|....:.......||.|:..|.:.|||||||:.|..||:|.|||:.|.
  Fly   184 DGQRILGLGDLGANGMGIAVGKMELYTALAGIPPSMLLPICLDVGTNNKSLHEDPLYIGLRDERL 248

  Fly   274 SEKLYDQLFEEFTLSVMQQYGPRALILCKDFEAQKAKKQLELYRERQCIVDVDFQCFAAVALAGV 338
            ....|....:||..:|:..:|.:.||..:||....|...|..|:...|..:.|.|..|||.|.|:
  Fly   249 KGDEYVCFVDEFMEAVVSTFGDQTLIHFEDFATPNAFMFLNRYQHCYCHFNDDIQGTAAVGLGGL 313

  Fly   339 IVCNRLKRVFFSSNVFLFYGAEAINIGMARLCMVLLKREGLIEMKAREKIWFFDANGLVVLGRKD 403
            :...|:.:.....:|.:|.||.:..:|:|.|..:.|...||.|..|.:.|:|:|.:|::...||.
  Fly   314 LGIQRITKKPLEEHVIVFAGAGSAAMGIAYLLKMELMSRGLSEADAAKNIYFYDQDGVLTTARKS 378

  Fly   404 IPEELLEFANQRDPILDLVEAIQELKPNILVGGSSLPNTFTPDVLRAMEKSADQPVIFALSRPLE 468
            ||:.|..||........|...::::||:|::|.:|.|..||..::|.|..|.::|.|||.|.|..
  Fly   379 IPDILCVFAKNMKETKSLETLVEQVKPSIIMGATSAPGLFTEKIIRTMAASHERPGIFAFSNPTI 443

  Fly   469 QTECSAEDAFSYTKGHCIFISGSKLPPLKYANKWYQPGHCTSSYLVAGISCGVMLAGFTNIPDEA 533
            ::||:||.|:.::.|..|:.:||..||:::..|...||...:.:....:....|....|.:|||.
  Fly   444 KSECTAEQAYKFSDGKAIYSAGSPFPPVEFNGKRLTPGQANNCFAFPALVLATMTVLATRMPDEI 508

  Fly   534 FCVAAERLASLVWPCDLEKRNVYPPMRKIQCISLQIAEAIFSYAFGRGLATLYPQPENPMEYIKN 598
            |.:||..||......:::...:||.:::...::.:|...:..|....|.|....:||:..|||:.
  Fly   509 FLLAAHELAEFPTNEEMQSGRIYPLVKQANEVAYKIGVKVAKYLIENGYAKRNLEPEDVEEYIEK 573

  Fly   599 SMYNPEYRMNIVDVY 613
            :.|...|..::.:.:
  Fly   574 NSYKLTYGSSLAETW 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7848NP_611127.1 PLN03129 81..606 CDD:215594 177/526 (34%)
malic 138..317 CDD:278802 61/181 (34%)
NAD_bind_1_malic_enz 327..603 CDD:133454 84/275 (31%)
Menl-1NP_001027428.1 PLN03129 35..582 CDD:215594 178/527 (34%)
malic 114..292 CDD:278802 61/179 (34%)
NAD_bind_1_malic_enz 302..576 CDD:133454 83/273 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469226
Domainoid 1 1.000 155 1.000 Domainoid score I893
eggNOG 1 0.900 - - E1_COG0281
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
87.890

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