DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7848 and Me3

DIOPT Version :10

Sequence 1:NP_611127.1 Gene:CG7848 / 36839 FlyBaseID:FBgn0034127 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001402901.1 Gene:Me3 / 361602 RGDID:1311070 Length:604 Species:Rattus norvegicus


Alignment Length:550 Identity:195/550 - (35%)
Similarity:316/550 - (57%) Gaps:9/550 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KVDGLWMLNQSNYNKGLAFTLNERRVLSIHGLLPVAVRTIDEQAEICSNLLESFTNNVQQYIYLT 133
            |..|..:....:.|||:||||.||..|.||||:|....:.|.|........|:..:::.:||.|.
  Rat    47 KKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYENQQSDLDKYIILM 111

  Fly   134 YLSRRNRRLFYYLLLSNPDRFVPMTDASGSIDLLMVH-RMIHSMGQGLYICIKDLGHVSQILSNW 197
            .|..||.:|||.:|.|:.::|:|:. .:.::.|...| .:.....:||:|.|.|.||::.:|::|
  Rat   112 TLQDRNEKLFYRVLTSDVEKFMPIV-YTPTVGLACQHYGLTFRRPRGLFITIHDKGHIATMLNSW 175

  Fly   198 PFRCVRCLLVSNGASVLSVGDLGVDEMPILFSNLHQNVVYGGIHPAYCLAVMLDVGTNNEELLND 262
            |...::.::|::|..:|.:||||...|.|....|......||::|..||.|:|||||||||||.|
  Rat   176 PEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240

  Fly   263 PMYTGLRERRCSEKLYDQLFEEFTLSVMQQYGPRALILCKDFEAQKAKKQLELYRERQCIVDVDF 327
            |:|.||:.:|...|.||.|.:||..:|..::|...||..:||....|.:.|..||.:.|:.:.|.
  Rat   241 PLYIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDI 305

  Fly   328 QCFAAVALAGVIVCNRLKRVFFSSNVFLFYGAEAINIGMARLCMVLLKREGLIEMKAREKIWFFD 392
            |..|:||:||::...|:.:...|::||:|.||....:|:|.|.::.|::||:.:.:|..|||..|
  Rat   306 QGTASVAVAGILAALRITKNRLSNHVFVFQGAGEAAMGIAHLLVMALEKEGIPKTEAVRKIWMVD 370

  Fly   393 ANGLVVLGRKDIPEELLEFANQRDPILDLVEAIQELKPNILVGGSSLPNTFTPDVLRAMEKSADQ 457
            :.||:|.||..:..|...||.:...:..|.|.::.:||..::|.:::...||..:||.|....::
  Rat   371 SKGLIVKGRSHLNHEKEMFAQEHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHER 435

  Fly   458 PVIFALSRPLEQTECSAEDAFSYTKGHCIFISGSKLPPLKYA----NKWYQPGHCTSSYLVAGIS 518
            |:|||||.|..:.||:||..:..|:|..||.|||   |.|..    .:.:.||...::|:..|::
  Rat   436 PIIFALSNPTSKAECTAEKCYQVTEGRGIFASGS---PFKSVTLEDGRTFIPGQGNNAYVFPGVA 497

  Fly   519 CGVMLAGFTNIPDEAFCVAAERLASLVWPCDLEKRNVYPPMRKIQCISLQIAEAIFSYAFGRGLA 583
            .|::..|..::|||.|.:.||::|..|....|.:..:|||:..|:.:||:||..:..||:...||
  Rat   498 LGIIAGGIRHVPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAVKVLDYAYKHNLA 562

  Fly   584 TLYPQPENPMEYIKNSMYNPEYRMNIVDVY 613
            :.||:|::...:||:.:|.|:|....:|.|
  Rat   563 SYYPEPKDKEAFIKSLIYTPDYDSFSLDTY 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7848NP_611127.1 PLN03129 81..606 CDD:215594 190/529 (36%)
Me3NP_001402901.1 PLN03129 9..587 CDD:215594 193/543 (36%)

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