DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7848 and me1

DIOPT Version :9

Sequence 1:NP_611127.1 Gene:CG7848 / 36839 FlyBaseID:FBgn0034127 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_002938500.1 Gene:me1 / 100489590 XenbaseID:XB-GENE-1013221 Length:589 Species:Xenopus tropicalis


Alignment Length:607 Identity:202/607 - (33%)
Similarity:328/607 - (54%) Gaps:31/607 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KDDEKKDNAEEELQKNKELKCVSNYDKTEILDYMPRYMDTFWKMDTRLSGSKVDGLWMLNQSNYN 82
            ||.|:::.:.::.: |::.|...:|.|..                         |..:....:.|
 Frog     5 KDTERQNQSGQQAE-NQDAKQTFHYTKKR-------------------------GYDITRDPHLN 43

  Fly    83 KGLAFTLNERRVLSIHGLLPVAVRTIDEQAEICSNLLESFTNNVQQYIYLTYLSRRNRRLFYYLL 147
            ||:||:|.||..|.||||||....:.|.|........|....::.:||.|..|..||.:|||.:|
 Frog    44 KGMAFSLEERLQLGIHGLLPPCFLSQDVQVLRVLRNYERQKCDLDRYILLMGLQDRNEKLFYKVL 108

  Fly   148 LSNPDRFVPM--TDASGSIDLLMVHRMIHSMGQGLYICIKDLGHVSQILSNWPFRCVRCLLVSNG 210
            .|:.:||:|:  |...|.  ....:.:.....:||:|.|.|.||:|.::.:||...::.::|::|
 Frog   109 TSDIERFMPVVYTPTVGL--ACQQYGLAFRRPRGLFITIHDRGHISTVMKSWPEDNIKAVVVTDG 171

  Fly   211 ASVLSVGDLGVDEMPILFSNLHQNVVYGGIHPAYCLAVMLDVGTNNEELLNDPMYTGLRERRCSE 275
            ..:|.:||||...|.|....|......||:.|..||.|||||||:|:||||||:|.|||.||...
 Frog   172 ERILGLGDLGSYGMGIPVGKLALYTACGGVQPQECLPVMLDVGTDNQELLNDPLYIGLRHRRVRG 236

  Fly   276 KLYDQLFEEFTLSVMQQYGPRALILCKDFEAQKAKKQLELYRERQCIVDVDFQCFAAVALAGVIV 340
            |.||:|.:||..:|.::||...||..:||....|.:.|.:||.:.|..:.|.|..||||:||::.
 Frog   237 KEYDELVDEFMKAVTERYGINCLIQFEDFANANAFRLLNMYRNKYCTFNDDIQGTAAVAVAGLLG 301

  Fly   341 CNRLKRVFFSSNVFLFYGAEAINIGMARLCMVLLKREGLIEMKAREKIWFFDANGLVVLGRKDIP 405
            ..|:.:...|.:..||.||....:|:|.|.::.:::||.....|.:.||..|:.||:|.||..:.
 Frog   302 ALRITKNKLSDHTVLFQGAGEAAMGIADLIVMAMEKEGTPRDAAIKNIWMVDSKGLIVKGRASLN 366

  Fly   406 EELLEFANQRDPILDLVEAIQELKPNILVGGSSLPNTFTPDVLRAMEKSADQPVIFALSRPLEQT 470
            .|...||:....:..|.|.::::||.:|:|.:::...||..:::.|....::|:|||||.|..:.
 Frog   367 HEKERFAHPHKEMKSLEEVVKDIKPTVLIGVAAIGGAFTEQIIKDMASFNNRPIIFALSNPTSKA 431

  Fly   471 ECSAEDAFSYTKGHCIFISGSKLPPLKYAN-KWYQPGHCTSSYLVAGISCGVMLAGFTNIPDEAF 534
            ||:||..:..|:|..||.|||...|:...: :...||...::|:..|::.||:..|..:|.|:.|
 Frog   432 ECTAEQCYRLTQGRGIFASGSPFDPVTLPDGRTLYPGQGNNAYVFPGVALGVVACGVRHISDDVF 496

  Fly   535 CVAAERLASLVWPCDLEKRNVYPPMRKIQCISLQIAEAIFSYAFGRGLATLYPQPENPMEYIKNS 599
            ...||.:|..|....||:..:|||::.||.:|::||..|...|:....|:::|:|||...::::.
 Frog   497 LTTAEIIAQQVSDKHLEEGRLYPPLQTIQEVSVKIAVKIVENAYKDNSASVFPEPENKEAFVRSQ 561

  Fly   600 MYNPEYRMNIVDVYCMQNRSIA 621
            ||:.:|...:||.|....:::|
 Frog   562 MYSTDYDQFMVDSYSWPQQAMA 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7848NP_611127.1 PLN03129 81..606 CDD:215594 189/527 (36%)
malic 138..317 CDD:278802 72/180 (40%)
NAD_bind_1_malic_enz 327..603 CDD:133454 91/276 (33%)
me1XP_002938500.1 PLN03129 31..571 CDD:215594 191/566 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D435571at2759
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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