DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6262 and tre-3

DIOPT Version :10

Sequence 1:NP_611123.2 Gene:CG6262 / 36833 FlyBaseID:FBgn0034121 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_001256361.1 Gene:tre-3 / 179604 WormBaseID:WBGene00006609 Length:608 Species:Caenorhabditis elegans


Alignment Length:573 Identity:183/573 - (31%)
Similarity:301/573 - (52%) Gaps:28/573 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EVLGGENRGVFCEGPLLDAVQRSKMFPDCKHFVDM------SCIFTPAQTLADFDMFTNCRRNDG 68
            :.....|..::|.||:||||....::.|.|.||||      ..::...:.........|..::| 
 Worm    30 DTTNSNNSFIYCNGPILDAVNYHSLYNDSKEFVDMPLKDDPQIVYNAWRAKYGNQSSANLNKSD- 93

  Fly    69 SLRFLQMFVEKHFNDPGSELEHWTPPDWKAQPSFLARISDPEIKQFGSDVNGLWKELGRRIKDEV 133
                :|.||.::|:..|:||...||.||:.:|..||.|:||:::::...:||:||:|.|:|...:
 Worm    94 ----VQAFVNQYFSAAGTELVVCTPDDWQEKPPKLATIADPKLREWAYKLNGIWKQLCRKIDPAI 154

  Fly   134 KENPDQYSIIYVPNPFIVPSSNCREYRYWESFWIIRGLLQCGMHQTARGMIDNYLELVQQYGFVP 198
            :::..:||::||||.||||....||:.||:::|||:||:...|:.|.|.||.|...:|.:|||||
 Worm   155 EQHTSRYSLLYVPNSFIVPGGRFREFYYWDAYWIIKGLIASDMYNTTRSMIRNLASMVDKYGFVP 219

  Fly   199 GCGRIYCSGRSNPPLLIMMVKAYVEVTKDEQYAIEALPLLETEYDTFISKH--SVQVKGRT--MY 259
            ..||:|...||.||.|..||....|.|.|:.:..|.||.|..|.:.:..|.  .||:.|::  :|
 Worm   220 NGGRVYYLQRSQPPFLAAMVYELYEATNDKAFVAELLPTLLKELNFWNEKRMTDVQMNGKSFKVY 284

  Fly   260 QYRDSSAGPRPEAYREDLECVASIKSPVVREVMYTELKSAAESGTNFSSRWYVTVDGSNKGSFRD 324
            ||:.:|..||||:||.|.:..|.:.:...::..|.:|.||||||.:||:||:     |:..:...
 Worm   285 QYKTASNVPRPESYRVDTQNSAKLANGADQQQFYQDLASAAESGWDFSTRWF-----SDYKTLTS 344

  Fly   325 IKTSAIVPVELNCIVFRSGKILAEFNRKAGNTKKADEYQDRACVLVKAIRDNLWNAQAGIWLDYD 389
            |:|:.::||:||.::..:..|:.....:.|:||.:..::::.......:::..:|...|.|.||:
 Worm   345 IETTKVLPVDLNGLLCWNMDIMEYLYEQIGDTKNSQIFRNKRADFRDTVQNVFYNRTDGTWYDYN 409

  Fly   390 LVNNKPRNYFCCTNFAPLWARAFPLVDTEKVSKGVMQYIKTNDLDAQYGGVPYTMNKESGQNWDH 454
            |........|..:...||:...:..::|.| |:.|..|:....:....||:|.:|::||.|.||.
 Worm   410 LRTQSHNPRFYTSTAVPLFTNCYNTLNTGK-SQKVFDYMDKMGVFTYPGGIPTSMSQESDQQWDF 473

  Fly   455 PNVFPPMMFLIIEGLENLGTPPAKAMSKRWAHRWVKSNYAAYKYESFMFEKY-YCEDFGTSGGSS 518
            ||.:.|...:|||||.....|..:......|.:||..|:..:.....|:||| ....:...|...
 Worm   474 PNGWSPNNHMIIEGLRKSANPEMQDKGFLIASKWVMGNFRVFYETGHMWEKYNVIGSYPQPGSGG 538

  Fly   519 PENTPLGYGWTNGVIIEFLCKYGKEI----SLADTSDEGSKSKSRGSKPSGKY 567
            ..:...|:||:||.|::.|..|...:    :..:|:...|...:..|.|  ||
 Worm   539 EYDVQDGFGWSNGAILDLLLTYNDRLFVPENFVNTTVTPSVESTTKSAP--KY 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6262NP_611123.2 Trehalase 33..541 CDD:418443 168/518 (32%)
tre-3NP_001256361.1 Trehalase 40..560 CDD:418443 175/530 (33%)

Return to query results.
Submit another query.