Protein Alignment wcd and AT5G14050

DIOPT Version :10

• Sequence 1: NP_611121.1
• Gene: wcd / 36831
• FlyBaseID: FBgn0262560
• Length: 506
• Species: Drosophila melanogaster
• Sequence 2: NP_196909.1
• Gene: AT5G14050 / 831254
• AraportID: AT5G14050
• Length: 546
• Species: Arabidopsis thaliana
• Alignment Length: 542
• Identity: 152/542 - (28%)
• Similarity: 262/542 - (48%)
• Gaps: 51/542 - (9%)

  Fly     7 SDGLEELQSLKALYGQQEQEKP-------AKIKRERYIPKASQAKELNYVEV-PMEKVLFGDRQR 63
            |.|::. :.||..|...|.|:.       .:.||.:...:..:.:|...||: .:|.::||....
plant    10 SKGIKR-EELKKQYEDVEDEEEIGSDDDLTRGKRRKTEKEKQKLEESELVEMKKLENLIFGSLYS 73

  Fly    64 LLT-------------NLAKSVGQKLP------NDDEDEQEENPGQAKPGDKRKAAWSDSDDEDL 109
            .:|             ::.:|..:::|      :|||:..:|..||.....|.:|||.|.:::.:
plant    74 PVTFGKEEEEDGSALFHVDRSAVRQIPDYEDDGDDDEELSDEENGQVVAIRKGEAAWEDEEEKQI 138

  Fly   110 QVGDVKKATKHTGPLNHLRKDK-----SYKEY---LTARFQRTLNQPKWA--EKKV---KNEDDE 161
            .| |:....:    |..|||::     |..||   |.|...:......||  :.::   ::.||:
plant   139 NV-DIASVNR----LRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGESSDDD 198

  Fly   162 DVSSD--EELLRTVGFIDRKARNSDLPQKTLNFKRVKDLNRATYAEGNATSIQFHPTSTAALVAG 224
            |....  :::|||...:..|:|.:.|....|.:.::.|.|.|..:.|...|:.||..:...|.||
plant   199 DTQDGGVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAADPSNGPINSVHFHQNAQLLLTAG 263

  Fly   225 MNGLATIYAVDGQKNERLHNMRFKKFPLACSRIAPCGTRAFFGSVKPFYYSYDLLEAKESKL-KL 288
            ::.....:.:||::|.::.::..:..|:..:...|.|::......:.|:||:||.:||..|: .|
plant   264 LDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQVIVSGRRKFFYSFDLEKAKFDKIGPL 328

  Fly   289 PGAME-FMHRFEVSPCGKFIVTAGKFGAIHLLTAKTNELLHSFKQEGKVKGFTWSSDSKRILVCG 352
            .|..| .:..||||.....|...|..|.|.|::.||.||:.:.|..|.|:...:|.|.|.:|..|
plant   329 VGREEKSLEYFEVSQDSNTIAFVGNEGYILLVSTKTKELIGTLKMNGSVRSLAFSEDGKHLLSSG 393

  Fly   353 STSNVSVLNLRQNLIEHIFMDDGCIHGESIQLSPNQRLLATGSQEGVVNIYDYESIFASKAPQPE 417
            ....|.|.:||.....:..:|:|...|.|:..|.|..|.|:|:..|:||||. :|.|.....:|.
plant   394 GDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGTDRGIVNIYK-KSEFVGGKRKPI 457

  Fly   418 KRFMNLRTAITDLQFNHSSELLAMCSSEAPNAFKLAHFPSATVYSNFPAQNEKVGFVTSMAFSPH 482
            |...||.:.|..::|||.:::||:.|:...|:.||.|.||.||:||:|..|..:.:...:.|||.
plant   458 KTVDNLTSKIDFMKFNHDAQILAIVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPG 522

  Fly   483 SSFLAFATKGKQVPLFRLKYFK 504
            |.|:|......:|.|::|.:::
plant   523 SGFMAMGNAAGKVLLYKLHHYQ 544

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
wcd	NP_611121.1	WD40	180..501	CDD:441893	102/322 (32%)
		WD40 repeat	209..247	CDD:293791	9/37 (24%)
		WD40 repeat	298..332	CDD:293791	13/33 (39%)
		WD40 repeat	337..371	CDD:293791	9/33 (27%)
		WD40 repeat	376..415	CDD:293791	14/38 (37%)
		WD40 repeat	428..465	CDD:293791	16/36 (44%)
AT5G14050	NP_196909.1	WD40	<244..540	CDD:441893	96/296 (32%)
		WD40 repeat	247..286	CDD:293791	9/38 (24%)
		WD40 repeat	292..330	CDD:293791	11/37 (30%)
		WD40 repeat	334..371	CDD:293791	13/36 (36%)
		WD40 repeat	378..414	CDD:293791	9/35 (26%)