Sequence 1: | NP_611121.1 | Gene: | wcd / 36831 | FlyBaseID: | FBgn0262560 | Length: | 506 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002729827.2 | Gene: | Poc1b / 100362836 | RGDID: | 2323942 | Length: | 477 | Species: | Rattus norvegicus |
Alignment Length: | 220 | Identity: | 49/220 - (22%) |
---|---|---|---|
Similarity: | 83/220 - (37%) | Gaps: | 51/220 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 209 TSIQFHPTSTAALVAGMNGLATIYAVD--GQKNERLHNMRFKKFPLACSRIAPCGTRAFFGSVKP 271
Fly 272 FYYSYD---LLEAKESKLKLPGAMEFMHRF--------------EVSPCGKFIVTAGKFGAIHLL 319
Fly 320 TAKTNELLHSFKQEGKVKGFT-WSSDSKRILVCGSTSNVSVLNLRQN-LIEHIFMDDGCIHG--- 379
Fly 380 ESIQLSPNQRLLATGSQEGVVNIYD 404 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wcd | NP_611121.1 | WD40 | <131..444 | CDD:225201 | 49/220 (22%) |
WD40 repeat | 209..247 | CDD:293791 | 9/39 (23%) | ||
WD40 | 296..>504 | CDD:295369 | 28/128 (22%) | ||
WD40 repeat | 298..332 | CDD:293791 | 8/47 (17%) | ||
WD40 repeat | 337..371 | CDD:293791 | 10/35 (29%) | ||
WD40 repeat | 376..415 | CDD:293791 | 9/32 (28%) | ||
WD40 repeat | 428..465 | CDD:293791 | |||
Poc1b | XP_002729827.2 | WD40 | 10..298 | CDD:238121 | 49/220 (22%) |
WD40 | 14..>300 | CDD:225201 | 49/220 (22%) | ||
WD40 repeat | 21..58 | CDD:293791 | |||
WD40 repeat | 64..100 | CDD:293791 | 11/47 (23%) | ||
WD40 repeat | 105..141 | CDD:293791 | 10/36 (28%) | ||
WD40 repeat | 148..183 | CDD:293791 | 6/34 (18%) | ||
WD40 repeat | 189..225 | CDD:293791 | 10/40 (25%) | ||
WD40 repeat | 231..267 | CDD:293791 | 8/26 (31%) | ||
WD40 repeat | 273..297 | CDD:293791 | |||
Ribosomal_S10 | <331..365 | CDD:294222 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |