Sequence 1: | NP_001286489.1 | Gene: | Nup62 / 36830 | FlyBaseID: | FBgn0034118 | Length: | 394 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001352054.1 | Gene: | NUP98 / 4928 | HGNCID: | 8068 | Length: | 1831 | Species: | Homo sapiens |
Alignment Length: | 481 | Identity: | 106/481 - (22%) |
---|---|---|---|
Similarity: | 162/481 - (33%) | Gaps: | 165/481 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 GATSSFSFGLSTGTPAAAPASGAATTAPATKTTFS----------FGTPAPTAGIG---GGDADN 66
Fly 67 SKAQAPPAFG--FGLGSGTASAPLTLGTQAAANPASTTSATATGTSAAPPAFGGFTAQPAASVVP 129
Fly 130 TIATSAPNTAATTTGLLG--GSGLGA--------PKTTAAASTTLTAAPSAIASTQ--------- 175
Fly 176 -------GAAPAP-TLSTG------------------------------GAFA----NLTTET-- 196
Fly 197 --------KTTDSSAVSTASQLSYHQLEEHINKWTLEFEEQEKVFTEQATQINAWDKLLISNNGK 253
Fly 254 IVELNDAVKKVKTD-----------QQVLDQELEFIATQQKELEDSLGPLEKEFVN---LPRVDM 304
Fly 305 ERSQTYLMVENLD-----TQLKQMSED----------------LKEIIDNLNEANKGQDT----- 343
Fly 344 -TDPIIQ--------IGKILNAHMNS 360 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup62 | NP_001286489.1 | Nsp1_C | 194..300 | CDD:309972 | 26/129 (20%) |
SMC_N | <213..392 | CDD:330553 | 35/197 (18%) | ||
NUP98 | NP_001352054.1 | Nucleoporin_FG | 40..149 | CDD:316182 | |
Nucleoporin_FG | 239..332 | CDD:316182 | 23/102 (23%) | ||
Herpes_BLLF1 | <243..666 | CDD:330317 | 98/452 (22%) | ||
Nucleoporin_FG | 363..463 | CDD:316182 | 24/101 (24%) | ||
Nucleoporin2 | 723..862 | CDD:309287 | |||
Nup96 | 1348..1637 | CDD:314912 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |