Sequence 1: | NP_001286489.1 | Gene: | Nup62 / 36830 | FlyBaseID: | FBgn0034118 | Length: | 394 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005162738.1 | Gene: | nup58 / 406510 | ZFINID: | ZDB-GENE-040426-2326 | Length: | 600 | Species: | Danio rerio |
Alignment Length: | 481 | Identity: | 115/481 - (23%) |
---|---|---|---|
Similarity: | 188/481 - (39%) | Gaps: | 149/481 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 TTAAPTGGATSSFSFGLSTGTPAAAPAS------GAATTAPATKTT------------------- 47
Fly 48 -FSFGTP-----APTAGIGGGDADNSKAQAPPAFGFGLGSGTASA-PLTLGTQAAANPAST---- 101
Fly 102 ----------TSAT--------ATGTSAAPPAFGGFTAQPAASVVPTIATSAPNTAATTTGLLGG 148
Fly 149 SGLGAPKTTAAASTTLTAAPSAIASTQGAAPAPTLSTGGAFANLTTETKTTDSSAVSTASQLSYH 213
Fly 214 QLEEHINKWTLE-------FEEQEKVFTEQATQINAWDKLLISNNGKIVELNDAVKKVKTDQQVL 271
Fly 272 DQELEFIATQQKELEDSLGPLEKEFVNLPRVDMERSQTY-------------------------- 310
Fly 311 --LMVENLDTQLKQMSEDLKEIIDNLNEANKGQDTT--DPIIQIGKILNAHMNSLQWIESQSTNI 371
Fly 372 -SKKLEDIGK----IQDSQKRDIFRA 392 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup62 | NP_001286489.1 | Nsp1_C | 194..300 | CDD:309972 | 19/112 (17%) |
SMC_N | <213..392 | CDD:330553 | 34/220 (15%) | ||
nup58 | XP_005162738.1 | Nucleoporin_FG2 | 64..600 | CDD:292589 | 95/430 (22%) |
VirB5_like | <356..>450 | CDD:295212 | 19/87 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |