Protein Alignment Nup62 and CG8086

DIOPT Version :9

• Sequence 1: NP_001286489.1
• Gene: Nup62 / 36830
• FlyBaseID: FBgn0034118
• Length: 394
• Species: Drosophila melanogaster
• Sequence 2: NP_001260237.1
• Gene: CG8086 / 34131
• FlyBaseID: FBgn0032010
• Length: 1603
• Species: Drosophila melanogaster
• Alignment Length: 307
• Identity: 71/307 - (23%)
• Similarity: 111/307 - (36%)
• Gaps: 83/307 - (27%)

  Fly    16 ATSSFSFGLSTG------TPAAA---PASGAATTAPATKTTFSFGT----------PAPTAGIGG 61
            :|.:|:||:..|      |||.:   |...:..:.||    :||||          |||    |.
  Fly  1337 STPAFTFGMRLGRERISDTPAPSAYEPEKHSLHSTPA----YSFGTKSDIRVTTDAPAP----GH 1393

  Fly    62 GDADNSKAQAPPAFGFGLGS-GTASAPLTLGT-----------QAAANPASTTSATATGTSAAPP 114
            ...:..|..:.||:.|||.: .|||.|...|.           :..|:|....:...|.|:
  Fly  1394 YHPEQCKLDSSPAYSFGLKTVPTASLPEPRGAYIEDRIVQRRERRLASPVRNNAECTTTTT---- 1454

  Fly   115 AFGGFTAQPAASVVPTIATSAPNTAATTTGLLGG---SGLGAPKTTAAASTT---LTAAPSAIAS 173
               ..|...|.|...|..|    |..||...:.|   ..|...:||...:.|   |.:||.|
  Fly  1455 ---NHTNNNAGSSTTTTTT----TTTTTKTFINGVEQPELQKKETTKQVNGTHKELKSAPQA--- 1509

  Fly   174 TQGAAPAPTLSTGGAFANLTTETKTTDSSAVSTASQLS--YHQLEEHINKWTLEFEEQEKVFTEQ 236
                    .||.|...:|      ...|..|||.:::.  .|..:|..|...:...:.:...|:.
  Fly  1510 --------PLSNGNIVSN------GNHSKMVSTTTRIQEVAHGQKESGNLKVVASGKSDASATKA 1560

  Fly   237 ATQINAWDKLLISNNGKIVELNDAVKKVKTDQQVLDQELEFIATQQK 283
            |...:   :.::..:|.||....:.:     .|.:...:|..:.|:|
  Fly  1561 AAVSH---QTVVQADGAIVTSGQSSR-----MQTVKYAVEASSVQEK 1599

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup62	NP_001286489.1	Nsp1_C	194..300	CDD:309972	16/92 (17%)
		SMC_N	<213..392	CDD:330553	12/71 (17%)
CG8086	NP_001260237.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R852
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.030