Sequence 1: | NP_001286489.1 | Gene: | Nup62 / 36830 | FlyBaseID: | FBgn0034118 | Length: | 394 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006234316.1 | Gene: | Nup62cl / 300923 | RGDID: | 1564353 | Length: | 273 | Species: | Rattus norvegicus |
Alignment Length: | 275 | Identity: | 94/275 - (34%) |
---|---|---|---|
Similarity: | 142/275 - (51%) | Gaps: | 25/275 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 123 PAASVVPTIATS---APNTAATTTGLLGGSGLGAPKTTAAASTTLTAAPSAIASTQGAAPAPTLS 184
Fly 185 TGGAFANLTTETKTTDSSAVSTASQLSYHQLEEHINKWTLEFEEQEKVFTEQATQINAWDKLLIS 249
Fly 250 NNGKIVELNDAVKKVKTDQQVLDQELEFIATQQKELEDSLGPLEKEF-------VNLPRVDMERS 307
Fly 308 QTYLMVENLDTQLKQMSEDLKEIIDNLNEANKGQDTTDPIIQIGKILNAHMNSLQWIESQSTNIS 372
Fly 373 KKLEDIGKIQDSQKR 387 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup62 | NP_001286489.1 | Nsp1_C | 194..300 | CDD:309972 | 41/112 (37%) |
SMC_N | <213..392 | CDD:330553 | 73/182 (40%) | ||
Nup62cl | XP_006234316.1 | Nsp1_C | 66..180 | CDD:398645 | 43/116 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342032 | |
Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I6230 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002862 | |
OrthoInspector | 1 | 1.000 | - | - | otm46127 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102783 | |
Panther | 1 | 1.100 | - | - | O | PTHR12084 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.840 |