Protein Alignment Nup62 and nsp1

DIOPT Version :10

• Sequence 1: NP_611120.1
• Gene: Nup62 / 36830
• FlyBaseID: FBgn0034118
• Length: 394
• Species: Drosophila melanogaster
• Sequence 2: NP_594158.1
• Gene: nsp1 / 2542668
• PomBaseID: SPAC26A3.15C
• Length: 598
• Species: Schizosaccharomyces pombe
• Alignment Length: 444
• Identity: 125/444 - (28%)
• Similarity: 205/444 - (46%)
• Gaps: 81/444 - (18%)

  Fly     7 TTTAAPTGGATSSFSFG--LSTGTPAAAPASGAATTAPATKT-TFSFGTPAPTAGIGGGDADNSK 68
            |.|..|...:|.|. ||  .:|||.:.||.:.:.:|.|||.: .||||.|   |.:|..:..::.
pombe   159 TNTTTPAAASTGSL-FGKPAATGTTSNAPPASSTSTTPATGSGGFSFGKP---ASLGSTNNASTS 219

  Fly    69 AQAPPAFGFGL-------GSGTASAPLT--LGTQ----AAAN-------------PASTTSATAT 107
            ..|...|.||.       ||.|...|.:  .||.    ||:|             ||...::|||
pombe   220 TTANSGFSFGKPATTSAPGSNTTVTPSSSITGTNDSKPAASNTGSAPTTGFSFGKPAGQAASTAT 284

  Fly   108 --GTSAAPPAFGGFTAQPAASVVPTIATSAPNTA----ATTTG------LLGGSGLGAPKTTAAA 160
              ||:....|..||:....|:...|...:|||:|    ||:||      ..|.:.    |.|...
pombe   285 DKGTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDNKPTFSFGNTS----KPTENT 345

  Fly   161 STTLTAAPSAIASTQGAAPAPTLSTGGAFANLTTETKTTDS------------------SAVSTA 207
            |||.|:||....:|:.|..|...|:|.:|....|:|.|:.|                  :..||.
pombe   346 STTATSAPPLSNNTKPAEGANQTSSGFSFGKPATDTTTSTSKTGPLFGNKPADPSAKPGATASTT 410

  Fly   208 ------SQLSYHQLEEHINKWTLEFEEQEKVFTEQATQINAWDKLLISNNGKIVELNDAVKKVKT 266
                  |.:.:..|:|.:|||:.:...|.:||.:...|::.||:.|:.|...|.:|.....:.:.
pombe   411 PSEPPPSSIKHKTLQEILNKWSTDLTTQTEVFNKLCDQVSDWDRTLVDNGALISKLYTETVEAEQ 475

  Fly   267 DQQVLDQELEFIATQQKELEDSLGPLEKEFVNL-----PRVDMERSQTYLMVENLDTQLKQMSED 326
            ....:|..||::::.|:||...|...|.:....     ..:::||.:.:.:.:::.::|.::.||
pombe   476 MSNRIDDGLEYVSSSQQELFKLLDSYETQLETFDGRATSALNVERERAFGVADDILSRLDRLGED 540

  Fly   327 LKEIIDNLNEANKGQDTTDPIIQIGKILNAHMNSLQWIESQSTNISKKLEDIGK 380
            |..:|:.:|:.:|..|:   |.:|.|:|||.:.||.|:|::...:.:||:.|.|
pombe   541 LGTVINQMNDFSKPDDS---ISEIVKVLNAQLASLGWVENRIFQMEEKLDTIKK 591

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup62	NP_611120.1	Nsp1_C	208..299	CDD:461540	24/90 (27%)
		Mplasa_alph_rch	<214..386	CDD:275316	47/172 (27%)
nsp1	NP_594158.1	Chi1	73..>269	CDD:442692	36/113 (32%)
		PHA03247	<176..416	CDD:223021	70/246 (28%)
		Nsp1_C	407..520	CDD:461540	26/112 (23%)