Sequence 1: | NP_001286489.1 | Gene: | Nup62 / 36830 | FlyBaseID: | FBgn0034118 | Length: | 394 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_594093.1 | Gene: | nup189 / 2541547 | PomBaseID: | SPAC1486.05 | Length: | 1778 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 296 | Identity: | 78/296 - (26%) |
---|---|---|---|
Similarity: | 104/296 - (35%) | Gaps: | 101/296 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 TTAAPT----GGAT-----SSFS-FGLSTGTPAAAPASGAATTAPATKTTFSFGTPAPTAGIGGG 62
Fly 63 DA---------------------DNSKAQAPPAFGFGLGSGTA---SAPL-TLGTQ--------A 94
Fly 95 AANPASTTSATATGTSAAPPAFGGFTAQPAASVVP-----TIATSAPNTAATTTGLLGGSGLGAP 154
Fly 155 KTTAAAST---------TLTAAPSAIASTQGAAPA------------------------------ 180
Fly 181 --------PTLSTGGAFANLTTETKTTDSSAVSTAS 208 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup62 | NP_001286489.1 | Nsp1_C | 194..300 | CDD:309972 | 4/15 (27%) |
SMC_N | <213..392 | CDD:330553 | |||
nup189 | NP_594093.1 | Nucleoporin_FG | 19..132 | CDD:290362 | |
Nucleoporin_FG | 241..337 | CDD:290362 | 7/22 (32%) | ||
Nucleoporin_FG | 515..601 | CDD:290362 | 13/85 (15%) | ||
Nucleoporin2 | 795..934 | CDD:282016 | |||
Nup96 | 1334..1629 | CDD:288926 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |