Sequence 1: | NP_001286489.1 | Gene: | Nup62 / 36830 | FlyBaseID: | FBgn0034118 | Length: | 394 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001367842.1 | Gene: | npp-10 / 175852 | WormBaseID: | WBGene00003796 | Length: | 1678 | Species: | Caenorhabditis elegans |
Alignment Length: | 451 | Identity: | 105/451 - (23%) |
---|---|---|---|
Similarity: | 164/451 - (36%) | Gaps: | 93/451 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 TTAAPTGGATSSFSFGLS------TGTPAAA-------PASGA-----ATTAPAT--KTTFS--F 50
Fly 51 GTPAPTAGIGG---GDADN-------------------SKAQAPP---AFGFGLGSGTASAPLTL 90
Fly 91 GTQAAANPAST----TSATATGTSAAPPAFGGFTAQPAASVVPTIATSAPNT----AATTTGLLG 147
Fly 148 G-SGLGAPKTTAA-ASTTLTAAPSAIASTQGAAPAPTLSTGGAFANLTTETKTTDSSAVSTASQL 210
Fly 211 SYHQLEE------HINKWTLEFEEQEKVFTEQATQINAWDKLLISNNGKIVELNDAVKKVKTDQQ 269
Fly 270 VLDQELEFIATQQKELEDSLGPLEKEFVNLPRVDMERSQTYLMVENLDTQLKQMSEDLKEIIDNL 334
Fly 335 ------NEANKGQDTTDPIIQIGKILNAHMNSLQWIESQSTNISKKLEDIGKIQDSQKRDI 389 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup62 | NP_001286489.1 | Nsp1_C | 194..300 | CDD:309972 | 19/111 (17%) |
SMC_N | <213..392 | CDD:330553 | 32/189 (17%) | ||
npp-10 | NP_001367842.1 | Nucleoporin_FG | 59..146 | CDD:404514 | |
Nucleoporin_FG | 110..240 | CDD:404514 | |||
Nucleoporin_FG | 237..334 | CDD:404514 | 27/90 (30%) | ||
Nucleoporin_FG | 305..431 | CDD:404514 | 38/135 (28%) | ||
Nucleoporin_FG | 407..>487 | CDD:404514 | 23/86 (27%) | ||
Nucleoporin2 | 777..919 | CDD:397975 | |||
Nup96 | 1259..1512 | CDD:403363 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |