Sequence 1: | NP_001286489.1 | Gene: | Nup62 / 36830 | FlyBaseID: | FBgn0034118 | Length: | 394 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_493552.1 | Gene: | npp-4 / 173329 | WormBaseID: | WBGene00003790 | Length: | 538 | Species: | Caenorhabditis elegans |
Alignment Length: | 413 | Identity: | 104/413 - (25%) |
---|---|---|---|
Similarity: | 159/413 - (38%) | Gaps: | 109/413 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 TTTAAPTGGATSSFSFGLST-----------GTPAAAPAS---GAATTAPATKTTFSFG-----T 52
Fly 53 PAPTAGI---GGGDADNSKAQAPPAFG-FGLGSGTASAPLTLGTQAAANPASTTSATATGT---S 110
Fly 111 AAPPAFGGFTAQPAASVVPTI------ATSAPNTAATTTGLLGGSGLGAPKTTAAASTTL----- 164
Fly 165 ---------TAAPSAIASTQGAAPAPTLSTGGAFANLTT---------ETK---------TTDSS 202
Fly 203 AVSTASQLSYHQLEEHINK---WTLEFEEQEKVFTEQATQIN---AWDKLLISNNGKIVELNDAV 261
Fly 262 KKVKTDQQVLDQEL----EFIATQQKELEDSLGPLEKEFVNL----PRVDMERSQTYLM-----V 313
Fly 314 ENLDTQLKQMSEDLKEIIDNLNE 336 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup62 | NP_001286489.1 | Nsp1_C | 194..300 | CDD:309972 | 23/137 (17%) |
SMC_N | <213..392 | CDD:330553 | 29/143 (20%) | ||
npp-4 | NP_493552.1 | Nucleoporin_FG | 21..122 | CDD:290362 | 36/109 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12084 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |